Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=10900
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=10925", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=10875", "results": [ { "id": 10891, "identifier": "353189", "identifier_type": "int", "name": "SLCO4C1", "properties": { "url": "http://identifiers.org/ncbigene/353189", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "solute carrier organic anion transporter family, member 4C1" }, "metanode": "Gene" }, { "id": 10892, "identifier": "PC7_6886", "identifier_type": "str", "name": "Regulation of IFNG signaling", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 10893, "identifier": "1488", "identifier_type": "int", "name": "CTBP2", "properties": { "url": "http://identifiers.org/ncbigene/1488", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "C-terminal binding protein 2" }, "metanode": "Gene" }, { "id": 10894, "identifier": "2806", "identifier_type": "int", "name": "GOT2", "properties": { "url": "http://identifiers.org/ncbigene/2806", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "glutamic-oxaloacetic transaminase 2, mitochondrial" }, "metanode": "Gene" }, { "id": 10895, "identifier": "GO:0072180", "identifier_type": "str", "name": "mesonephric duct morphogenesis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0072180", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 10896, "identifier": "C0917801", "identifier_type": "str", "name": "Insomnia", "properties": { "url": "http://identifiers.org/umls/C0917801", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 10897, "identifier": "79902", "identifier_type": "int", "name": "NUP85", "properties": { "url": "http://identifiers.org/ncbigene/79902", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "nucleoporin 85kDa" }, "metanode": "Gene" }, { "id": 10898, "identifier": "GO:0031072", "identifier_type": "str", "name": "heat shock protein binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0031072", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 10899, "identifier": "GO:0036315", "identifier_type": "str", "name": "cellular response to sterol", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0036315", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 10900, "identifier": "55281", "identifier_type": "int", "name": "TMEM140", "properties": { "url": "http://identifiers.org/ncbigene/55281", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "transmembrane protein 140" }, "metanode": "Gene" }, { "id": 10901, "identifier": "347853", "identifier_type": "int", "name": "TBX10", "properties": { "url": "http://identifiers.org/ncbigene/347853", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "T-box 10" }, "metanode": "Gene" }, { "id": 10902, "identifier": "26737", "identifier_type": "int", "name": "OR1L1", "properties": { "url": "http://identifiers.org/ncbigene/26737", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "olfactory receptor, family 1, subfamily L, member 1" }, "metanode": "Gene" }, { "id": 10903, "identifier": "GO:0043367", "identifier_type": "str", "name": "CD4-positive, alpha-beta T cell differentiation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043367", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 10904, "identifier": "GO:0019827", "identifier_type": "str", "name": "stem cell population maintenance", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0019827", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 10905, "identifier": "23098", "identifier_type": "int", "name": "SARM1", "properties": { "url": "http://identifiers.org/ncbigene/23098", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "sterile alpha and TIR motif containing 1" }, "metanode": "Gene" }, { "id": 10906, "identifier": "7584", "identifier_type": "int", "name": "ZNF35", "properties": { "url": "http://identifiers.org/ncbigene/7584", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "zinc finger protein 35" }, "metanode": "Gene" }, { "id": 10907, "identifier": "GO:0008380", "identifier_type": "str", "name": "RNA splicing", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0008380", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 10908, "identifier": "PC7_5990", "identifier_type": "str", "name": "Nuclear import of Rev protein", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 10909, "identifier": "84066", "identifier_type": "int", "name": "TEX35", "properties": { "url": "http://identifiers.org/ncbigene/84066", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "testis expressed 35" }, "metanode": "Gene" }, { "id": 10910, "identifier": "GO:0021877", "identifier_type": "str", "name": "forebrain neuron fate commitment", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0021877", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 10911, "identifier": "GO:0098651", "identifier_type": "str", "name": "basement membrane collagen trimer", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0098651", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 10912, "identifier": "C0010200", "identifier_type": "str", "name": "Cough", "properties": { "url": "http://identifiers.org/umls/C0010200", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 10913, "identifier": "195814", "identifier_type": "int", "name": "SDR16C5", "properties": { "url": "http://identifiers.org/ncbigene/195814", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "short chain dehydrogenase/reductase family 16C, member 5" }, "metanode": "Gene" }, { "id": 10914, "identifier": "GO:2000677", "identifier_type": "str", "name": "regulation of transcription regulatory region DNA binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000677", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 10915, "identifier": "100996461", "identifier_type": "int", "name": "LOC100996461", "properties": { "url": "http://identifiers.org/ncbigene/100996461", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "uncharacterized LOC100996461" }, "metanode": "Gene" } ] }