Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=10950

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=10975",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=10925",
    "results": [
        {
            "id": 10941,
            "identifier": "PC7_3060",
            "identifier_type": "str",
            "name": "Degradation of GLI1 by the proteasome",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 10942,
            "identifier": "GO:0043304",
            "identifier_type": "str",
            "name": "regulation of mast cell degranulation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0043304",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 10943,
            "identifier": "GO:0060379",
            "identifier_type": "str",
            "name": "cardiac muscle cell myoblast differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060379",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 10944,
            "identifier": "51135",
            "identifier_type": "int",
            "name": "IRAK4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51135",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "interleukin-1 receptor-associated kinase 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 10945,
            "identifier": "DB09009",
            "identifier_type": "str",
            "name": "Articaine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB09009",
                "inchi": "InChI=1/C13H20N2O3S/c1-5-6-14-9(3)12(16)15-10-8(2)7-19-11(10)13(17)18-4/h7,9,14H,5-6H2,1-4H3,(H,15,16)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=QTGIAADRBBLJGA-UHFFFAOYNA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 10946,
            "identifier": "102724813",
            "identifier_type": "int",
            "name": "LOC102724813",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102724813",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "protein FRG1B"
            },
            "metanode": "Gene"
        },
        {
            "id": 10947,
            "identifier": "N0000008010",
            "identifier_type": "str",
            "name": "Cannabinoids",
            "properties": {
                "url": "http://purl.bioontology.org/ontology/NDFRT/N0000008010",
                "source": "FDA via DrugCentral",
                "license": "CC BY 4.0",
                "class_type": "Chemical/Ingredient"
            },
            "metanode": "Pharmacologic Class"
        },
        {
            "id": 10948,
            "identifier": "101928021",
            "identifier_type": "int",
            "name": "LOC101928021",
            "properties": {
                "url": "http://identifiers.org/ncbigene/101928021",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "formin-like protein 18"
            },
            "metanode": "Gene"
        },
        {
            "id": 10949,
            "identifier": "3694",
            "identifier_type": "int",
            "name": "ITGB6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3694",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "integrin, beta 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 10950,
            "identifier": "80790",
            "identifier_type": "int",
            "name": "CMIP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/80790",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "c-Maf inducing protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 10951,
            "identifier": "130940",
            "identifier_type": "int",
            "name": "CCDC148",
            "properties": {
                "url": "http://identifiers.org/ncbigene/130940",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "coiled-coil domain containing 148"
            },
            "metanode": "Gene"
        },
        {
            "id": 10952,
            "identifier": "GO:0042450",
            "identifier_type": "str",
            "name": "arginine biosynthetic process via ornithine",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0042450",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 10953,
            "identifier": "283677",
            "identifier_type": "int",
            "name": "REC114",
            "properties": {
                "url": "http://identifiers.org/ncbigene/283677",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "REC114 meiotic recombination protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 10954,
            "identifier": "6019",
            "identifier_type": "int",
            "name": "RLN2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6019",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "relaxin 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 10955,
            "identifier": "10558",
            "identifier_type": "int",
            "name": "SPTLC1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10558",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "serine palmitoyltransferase, long chain base subunit 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 10956,
            "identifier": "C0001623",
            "identifier_type": "str",
            "name": "Adrenal insufficiency",
            "properties": {
                "url": "http://identifiers.org/umls/C0001623",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 10957,
            "identifier": "DOID:11949",
            "identifier_type": "str",
            "name": "Creutzfeldt-Jakob disease",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/DOID_11949",
                "source": "Disease Ontology",
                "license": "CC BY 3.0"
            },
            "metanode": "Disease"
        },
        {
            "id": 10958,
            "identifier": "91120",
            "identifier_type": "int",
            "name": "ZNF682",
            "properties": {
                "url": "http://identifiers.org/ncbigene/91120",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 682"
            },
            "metanode": "Gene"
        },
        {
            "id": 10959,
            "identifier": "115361",
            "identifier_type": "int",
            "name": "GBP4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/115361",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "guanylate binding protein 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 10960,
            "identifier": "DB04894",
            "identifier_type": "str",
            "name": "Vapreotide",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB04894",
                "inchi": "InChI=1S/C57H70N12O9S2/c1-32(2)49-57(78)68-48(55(76)64-44(50(60)71)28-37-26-35-14-6-8-16-41(35)62-37)31-80-79-30-47(67-51(72)40(59)24-33-12-4-3-5-13-33)56(77)65-45(25-34-19-21-38(70)22-20-34)53(74)66-46(27-36-29-61-42-17-9-7-15-39(36)42)54(75)63-43(52(73)69-49)18-10-11-23-58/h3-9,12-17,19-22,26,29,32,40,43-49,61-62,70H,10-11,18,23-25,27-28,30-31,58-59H2,1-2H3,(H2,60,71)(H,63,75)(H,64,76)(H,65,77)(H,66,74)(H,67,72)(H,68,78)(H,69,73)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=GAWXLRUZZFSQON-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 10961,
            "identifier": "54414",
            "identifier_type": "int",
            "name": "SIAE",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54414",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "sialic acid acetylesterase"
            },
            "metanode": "Gene"
        },
        {
            "id": 10962,
            "identifier": "GO:0043620",
            "identifier_type": "str",
            "name": "regulation of DNA-templated transcription in response to stress",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0043620",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 10963,
            "identifier": "C0206063",
            "identifier_type": "str",
            "name": "Radiation pneumonitis",
            "properties": {
                "url": "http://identifiers.org/umls/C0206063",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 10964,
            "identifier": "84954",
            "identifier_type": "int",
            "name": "MPND",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84954",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "MPN domain containing"
            },
            "metanode": "Gene"
        },
        {
            "id": 10965,
            "identifier": "GO:0050680",
            "identifier_type": "str",
            "name": "negative regulation of epithelial cell proliferation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0050680",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}