Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=1125

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=1150",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=1100",
    "results": [
        {
            "id": 1123,
            "identifier": "DB08965",
            "identifier_type": "str",
            "name": "Fusafungine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB08965",
                "inchi": "InChI=1/C33H57N3O9/c1-16(2)22-31(40)43-26(20(9)10)29(38)35(14)24(18(5)6)33(42)45-27(21(11)12)30(39)36(15)23(17(3)4)32(41)44-25(19(7)8)28(37)34(22)13/h16-27H,1-15H3/t22-,23-,24-,25?,26?,27?/s2",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=MIZMDSVSLSIMSC-ZLKDNEIBNA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 1124,
            "identifier": "PC7_7484",
            "identifier_type": "str",
            "name": "Signaling by Wnt",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 1125,
            "identifier": "GO:0021824",
            "identifier_type": "str",
            "name": "cerebral cortex tangential migration using cell-axon interactions",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021824",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 1126,
            "identifier": "79969",
            "identifier_type": "int",
            "name": "ATAT1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79969",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "alpha tubulin acetyltransferase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 1127,
            "identifier": "GO:0016215",
            "identifier_type": "str",
            "name": "acyl-CoA desaturase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016215",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 1128,
            "identifier": "GO:0046755",
            "identifier_type": "str",
            "name": "viral budding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0046755",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 1129,
            "identifier": "GO:0046440",
            "identifier_type": "str",
            "name": "L-lysine metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0046440",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 1130,
            "identifier": "5214",
            "identifier_type": "int",
            "name": "PFKP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5214",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "phosphofructokinase, platelet"
            },
            "metanode": "Gene"
        },
        {
            "id": 1131,
            "identifier": "55236",
            "identifier_type": "int",
            "name": "UBA6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55236",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "ubiquitin-like modifier activating enzyme 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 1132,
            "identifier": "DB01203",
            "identifier_type": "str",
            "name": "Nadolol",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01203",
                "inchi": "InChI=1S/C17H27NO4/c1-17(2,3)18-9-12(19)10-22-16-6-4-5-11-7-14(20)15(21)8-13(11)16/h4-6,12,14-15,18-21H,7-10H2,1-3H3/t12?,14-,15+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=VWPOSFSPZNDTMJ-UCWKZMIHSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 1133,
            "identifier": "90187",
            "identifier_type": "int",
            "name": "EMILIN3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/90187",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "elastin microfibril interfacer 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 1134,
            "identifier": "DB00849",
            "identifier_type": "str",
            "name": "Methylphenobarbital",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00849",
                "inchi": "InChI=1S/C13H14N2O3/c1-3-13(9-7-5-4-6-8-9)10(16)14-12(18)15(2)11(13)17/h4-8H,3H2,1-2H3,(H,14,16,18)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=ALARQZQTBTVLJV-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 1135,
            "identifier": "124583",
            "identifier_type": "int",
            "name": "CANT1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/124583",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "calcium activated nucleotidase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 1136,
            "identifier": "23053",
            "identifier_type": "int",
            "name": "ZSWIM8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23053",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "zinc finger, SWIM-type containing 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 1137,
            "identifier": "GO:0010749",
            "identifier_type": "str",
            "name": "regulation of nitric oxide mediated signal transduction",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010749",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 1138,
            "identifier": "C0860703",
            "identifier_type": "str",
            "name": "Serum total protein decreased",
            "properties": {
                "url": "http://identifiers.org/umls/C0860703",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 1139,
            "identifier": "GO:0015893",
            "identifier_type": "str",
            "name": "drug transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0015893",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 1140,
            "identifier": "C0023646",
            "identifier_type": "str",
            "name": "Lichen planus",
            "properties": {
                "url": "http://identifiers.org/umls/C0023646",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 1141,
            "identifier": "56062",
            "identifier_type": "int",
            "name": "KLHL4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56062",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "kelch-like family member 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 1142,
            "identifier": "D004489",
            "identifier_type": "str",
            "name": "Edema, Cardiac",
            "properties": {
                "url": "http://identifiers.org/mesh/D004489",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 1143,
            "identifier": "79595",
            "identifier_type": "int",
            "name": "SAP130",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79595",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "Sin3A-associated protein, 130kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 1144,
            "identifier": "PC7_8264",
            "identifier_type": "str",
            "name": "Thrombin signalling through proteinase activated receptors (PARs)",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 1145,
            "identifier": "105376337",
            "identifier_type": "int",
            "name": "LOC105376337",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105376337",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "uncharacterized LOC105376337"
            },
            "metanode": "Gene"
        },
        {
            "id": 1146,
            "identifier": "C1510497",
            "identifier_type": "str",
            "name": "Lenticular opacities",
            "properties": {
                "url": "http://identifiers.org/umls/C1510497",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 1147,
            "identifier": "GO:1990130",
            "identifier_type": "str",
            "name": "Iml1 complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1990130",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        }
    ]
}