Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=11325
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=11350", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=11300", "results": [ { "id": 11315, "identifier": "D000550", "identifier_type": "str", "name": "Amblyopia", "properties": { "url": "http://identifiers.org/mesh/D000550", "source": "MeSH", "license": "CC0 1.0" }, "metanode": "Symptom" }, { "id": 11316, "identifier": "GO:0001055", "identifier_type": "str", "name": "RNA polymerase II activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0001055", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 11317, "identifier": "221416", "identifier_type": "int", "name": "C6orf223", "properties": { "url": "http://identifiers.org/ncbigene/221416", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "chromosome 6 open reading frame 223" }, "metanode": "Gene" }, { "id": 11318, "identifier": "23210", "identifier_type": "int", "name": "JMJD6", "properties": { "url": "http://identifiers.org/ncbigene/23210", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "jumonji domain containing 6" }, "metanode": "Gene" }, { "id": 11319, "identifier": "C0008728", "identifier_type": "str", "name": "Allergic granulomatous angiitis", "properties": { "url": "http://identifiers.org/umls/C0008728", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 11320, "identifier": "PC7_2631", "identifier_type": "str", "name": "Clearance of Nuclear Envelope Membranes from Chromatin", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 11321, "identifier": "64854", "identifier_type": "int", "name": "USP46", "properties": { "url": "http://identifiers.org/ncbigene/64854", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "ubiquitin specific peptidase 46" }, "metanode": "Gene" }, { "id": 11322, "identifier": "WP289_r81078", "identifier_type": "str", "name": "Myometrial Relaxation and Contraction Pathways", "properties": { "url": "http://www.wikipathways.org/instance/WP289_r81078", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 11323, "identifier": "100996573", "identifier_type": "int", "name": "LOC100996573", "properties": { "url": "http://identifiers.org/ncbigene/100996573", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "uncharacterized LOC100996573" }, "metanode": "Gene" }, { "id": 11324, "identifier": "79624", "identifier_type": "int", "name": "ARMT1", "properties": { "url": "http://identifiers.org/ncbigene/79624", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "acidic residue methyltransferase 1" }, "metanode": "Gene" }, { "id": 11325, "identifier": "773", "identifier_type": "int", "name": "CACNA1A", "properties": { "url": "http://identifiers.org/ncbigene/773", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "calcium channel, voltage-dependent, P/Q type, alpha 1A subunit" }, "metanode": "Gene" }, { "id": 11326, "identifier": "9392", "identifier_type": "int", "name": "TGFBRAP1", "properties": { "url": "http://identifiers.org/ncbigene/9392", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "transforming growth factor, beta receptor associated protein 1" }, "metanode": "Gene" }, { "id": 11327, "identifier": "DB01162", "identifier_type": "str", "name": "Terazosin", "properties": { "url": "http://www.drugbank.ca/drugs/DB01162", "inchi": "InChI=1S/C19H25N5O4/c1-26-15-10-12-13(11-16(15)27-2)21-19(22-17(12)20)24-7-5-23(6-8-24)18(25)14-4-3-9-28-14/h10-11,14H,3-9H2,1-2H3,(H2,20,21,22)", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=VCKUSRYTPJJLNI-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 11328, "identifier": "C0152191", "identifier_type": "str", "name": "Central scotoma", "properties": { "url": "http://identifiers.org/umls/C0152191", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 11329, "identifier": "GO:0052251", "identifier_type": "str", "name": "induction by organism of defense response of other organism involved in symbiotic interaction", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0052251", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11330, "identifier": "3226", "identifier_type": "int", "name": "HOXC10", "properties": { "url": "http://identifiers.org/ncbigene/3226", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "homeobox C10" }, "metanode": "Gene" }, { "id": 11331, "identifier": "57787", "identifier_type": "int", "name": "MARK4", "properties": { "url": "http://identifiers.org/ncbigene/57787", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "MAP/microtubule affinity-regulating kinase 4" }, "metanode": "Gene" }, { "id": 11332, "identifier": "GO:0016775", "identifier_type": "str", "name": "phosphotransferase activity, nitrogenous group as acceptor", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0016775", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 11333, "identifier": "GO:0030036", "identifier_type": "str", "name": "actin cytoskeleton organization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030036", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11334, "identifier": "GO:0097452", "identifier_type": "str", "name": "GAIT complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0097452", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 11335, "identifier": "5695", "identifier_type": "int", "name": "PSMB7", "properties": { "url": "http://identifiers.org/ncbigene/5695", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "proteasome (prosome, macropain) subunit, beta type, 7" }, "metanode": "Gene" }, { "id": 11336, "identifier": "10346", "identifier_type": "int", "name": "TRIM22", "properties": { "url": "http://identifiers.org/ncbigene/10346", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "tripartite motif containing 22" }, "metanode": "Gene" }, { "id": 11337, "identifier": "51621", "identifier_type": "int", "name": "KLF13", "properties": { "url": "http://identifiers.org/ncbigene/51621", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "Kruppel-like factor 13" }, "metanode": "Gene" }, { "id": 11338, "identifier": "90668", "identifier_type": "int", "name": "LRRC16B", "properties": { "url": "http://identifiers.org/ncbigene/90668", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "leucine rich repeat containing 16B" }, "metanode": "Gene" }, { "id": 11339, "identifier": "GO:0002315", "identifier_type": "str", "name": "marginal zone B cell differentiation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002315", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }