Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=11350
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=11375", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=11325", "results": [ { "id": 11340, "identifier": "7035", "identifier_type": "int", "name": "TFPI", "properties": { "url": "http://identifiers.org/ncbigene/7035", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)" }, "metanode": "Gene" }, { "id": 11341, "identifier": "134147", "identifier_type": "int", "name": "CMBL", "properties": { "url": "http://identifiers.org/ncbigene/134147", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "carboxymethylenebutenolidase homolog (Pseudomonas)" }, "metanode": "Gene" }, { "id": 11342, "identifier": "GO:0008513", "identifier_type": "str", "name": "secondary active organic cation transmembrane transporter activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0008513", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 11343, "identifier": "DB00728", "identifier_type": "str", "name": "Rocuronium", "properties": { "url": "http://www.drugbank.ca/drugs/DB00728", "inchi": "InChI=1S/C32H53N2O4/c1-5-14-34(15-6-7-16-34)28-20-26-24-9-8-23-19-29(36)27(33-12-17-37-18-13-33)21-32(23,4)25(24)10-11-31(26,3)30(28)38-22(2)35/h5,23-30,36H,1,6-21H2,2-4H3/q+1/t23-,24+,25-,26-,27-,28-,29-,30-,31-,32-/m0/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=YXRDKMPIGHSVRX-OOJCLDBCSA-N" }, "metanode": "Compound" }, { "id": 11344, "identifier": "GO:0048148", "identifier_type": "str", "name": "behavioral response to cocaine", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048148", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11345, "identifier": "GO:0048660", "identifier_type": "str", "name": "regulation of smooth muscle cell proliferation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048660", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11346, "identifier": "GO:0050867", "identifier_type": "str", "name": "positive regulation of cell activation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0050867", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11347, "identifier": "101929805", "identifier_type": "int", "name": "LOC101929805", "properties": { "url": "http://identifiers.org/ncbigene/101929805", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "myomegalin-like" }, "metanode": "Gene" }, { "id": 11348, "identifier": "6633", "identifier_type": "int", "name": "SNRPD2", "properties": { "url": "http://identifiers.org/ncbigene/6633", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "small nuclear ribonucleoprotein D2 polypeptide 16.5kDa" }, "metanode": "Gene" }, { "id": 11349, "identifier": "146212", "identifier_type": "int", "name": "KCTD19", "properties": { "url": "http://identifiers.org/ncbigene/146212", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "potassium channel tetramerization domain containing 19" }, "metanode": "Gene" }, { "id": 11350, "identifier": "GO:2001022", "identifier_type": "str", "name": "positive regulation of response to DNA damage stimulus", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2001022", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11351, "identifier": "GO:0097493", "identifier_type": "str", "name": "structural molecule activity conferring elasticity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0097493", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 11352, "identifier": "GO:0010721", "identifier_type": "str", "name": "negative regulation of cell development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0010721", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11353, "identifier": "GO:0086029", "identifier_type": "str", "name": "Purkinje myocyte to ventricular cardiac muscle cell signaling", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0086029", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11354, "identifier": "147923", "identifier_type": "int", "name": "ZNF420", "properties": { "url": "http://identifiers.org/ncbigene/147923", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "zinc finger protein 420" }, "metanode": "Gene" }, { "id": 11355, "identifier": "PC7_7747", "identifier_type": "str", "name": "Synthesis of PIPs at the ER membrane", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 11356, "identifier": "1209", "identifier_type": "int", "name": "CLPTM1", "properties": { "url": "http://identifiers.org/ncbigene/1209", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "cleft lip and palate associated transmembrane protein 1" }, "metanode": "Gene" }, { "id": 11357, "identifier": "GO:0033623", "identifier_type": "str", "name": "regulation of integrin activation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0033623", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11358, "identifier": "GO:0040016", "identifier_type": "str", "name": "embryonic cleavage", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0040016", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11359, "identifier": "PC7_2535", "identifier_type": "str", "name": "Ceramide signaling pathway", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 11360, "identifier": "C0338656", "identifier_type": "str", "name": "Cognitive impairment", "properties": { "url": "http://identifiers.org/umls/C0338656", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 11361, "identifier": "3806", "identifier_type": "int", "name": "KIR2DS1", "properties": { "url": "http://identifiers.org/ncbigene/3806", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 1" }, "metanode": "Gene" }, { "id": 11362, "identifier": "GO:0030306", "identifier_type": "str", "name": "ADP-ribosylation factor binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030306", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 11363, "identifier": "C0035222", "identifier_type": "str", "name": "Acute respiratory distress syndrome", "properties": { "url": "http://identifiers.org/umls/C0035222", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 11364, "identifier": "WP185_r80036", "identifier_type": "str", "name": "Integrin-mediated Cell Adhesion", "properties": { "url": "http://www.wikipathways.org/instance/WP185_r80036", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" } ] }