Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=11625
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=11650", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=11600", "results": [ { "id": 11615, "identifier": "GO:0015931", "identifier_type": "str", "name": "nucleobase-containing compound transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0015931", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11616, "identifier": "9063", "identifier_type": "int", "name": "PIAS2", "properties": { "url": "http://identifiers.org/ncbigene/9063", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "18", "description": "protein inhibitor of activated STAT, 2" }, "metanode": "Gene" }, { "id": 11617, "identifier": "C0018924", "identifier_type": "str", "name": "Haemarthrosis", "properties": { "url": "http://identifiers.org/umls/C0018924", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 11618, "identifier": "389690", "identifier_type": "int", "name": "MROH5", "properties": { "url": "http://identifiers.org/ncbigene/389690", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "maestro heat-like repeat family member 5" }, "metanode": "Gene" }, { "id": 11619, "identifier": "GO:0031349", "identifier_type": "str", "name": "positive regulation of defense response", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0031349", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11620, "identifier": "GO:1903051", "identifier_type": "str", "name": "negative regulation of proteolysis involved in cellular protein catabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903051", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11621, "identifier": "PC7_3434", "identifier_type": "str", "name": "ERK/MAPK targets", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 11622, "identifier": "GO:0000793", "identifier_type": "str", "name": "condensed chromosome", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0000793", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 11623, "identifier": "5350", "identifier_type": "int", "name": "PLN", "properties": { "url": "http://identifiers.org/ncbigene/5350", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "phospholamban" }, "metanode": "Gene" }, { "id": 11624, "identifier": "51276", "identifier_type": "int", "name": "ZNF571", "properties": { "url": "http://identifiers.org/ncbigene/51276", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "zinc finger protein 571" }, "metanode": "Gene" }, { "id": 11625, "identifier": "GO:0030218", "identifier_type": "str", "name": "erythrocyte differentiation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030218", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11626, "identifier": "221395", "identifier_type": "int", "name": "ADGRF5", "properties": { "url": "http://identifiers.org/ncbigene/221395", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "adhesion G protein-coupled receptor F5" }, "metanode": "Gene" }, { "id": 11627, "identifier": "GO:0042752", "identifier_type": "str", "name": "regulation of circadian rhythm", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042752", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11628, "identifier": "23189", "identifier_type": "int", "name": "KANK1", "properties": { "url": "http://identifiers.org/ncbigene/23189", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "KN motif and ankyrin repeat domains 1" }, "metanode": "Gene" }, { "id": 11629, "identifier": "PC7_7499", "identifier_type": "str", "name": "Signaling events regulated by Ret tyrosine kinase", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 11630, "identifier": "GO:0016338", "identifier_type": "str", "name": "calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0016338", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11631, "identifier": "GO:0048168", "identifier_type": "str", "name": "regulation of neuronal synaptic plasticity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048168", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11632, "identifier": "WP106_r74147", "identifier_type": "str", "name": "Alanine and aspartate metabolism", "properties": { "url": "http://www.wikipathways.org/instance/WP106_r74147", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 11633, "identifier": "7101", "identifier_type": "int", "name": "NR2E1", "properties": { "url": "http://identifiers.org/ncbigene/7101", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "nuclear receptor subfamily 2, group E, member 1" }, "metanode": "Gene" }, { "id": 11634, "identifier": "GO:1901702", "identifier_type": "str", "name": "salt transmembrane transporter activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1901702", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 11635, "identifier": "GO:0001105", "identifier_type": "str", "name": "RNA polymerase II transcription coactivator activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0001105", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 11636, "identifier": "GO:0005785", "identifier_type": "str", "name": "signal recognition particle receptor complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005785", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 11637, "identifier": "GO:0006882", "identifier_type": "str", "name": "cellular zinc ion homeostasis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006882", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11638, "identifier": "26512", "identifier_type": "int", "name": "INTS6", "properties": { "url": "http://identifiers.org/ncbigene/26512", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "13", "description": "integrator complex subunit 6" }, "metanode": "Gene" }, { "id": 11817, "identifier": "GO:0060746", "identifier_type": "str", "name": "parental behavior", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0060746", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }