Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=11650
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=11675", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=11625", "results": [ { "id": 11639, "identifier": "GO:1904435", "identifier_type": "str", "name": "regulation of transferrin receptor binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1904435", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11640, "identifier": "64689", "identifier_type": "int", "name": "GORASP1", "properties": { "url": "http://identifiers.org/ncbigene/64689", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "golgi reassembly stacking protein 1, 65kDa" }, "metanode": "Gene" }, { "id": 11641, "identifier": "79731", "identifier_type": "int", "name": "NARS2", "properties": { "url": "http://identifiers.org/ncbigene/79731", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "asparaginyl-tRNA synthetase 2, mitochondrial (putative)" }, "metanode": "Gene" }, { "id": 11642, "identifier": "GO:2000757", "identifier_type": "str", "name": "negative regulation of peptidyl-lysine acetylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000757", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11643, "identifier": "282618", "identifier_type": "int", "name": "IFNL1", "properties": { "url": "http://identifiers.org/ncbigene/282618", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "interferon, lambda 1" }, "metanode": "Gene" }, { "id": 11644, "identifier": "864", "identifier_type": "int", "name": "RUNX3", "properties": { "url": "http://identifiers.org/ncbigene/864", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "runt-related transcription factor 3" }, "metanode": "Gene" }, { "id": 11645, "identifier": "9371", "identifier_type": "int", "name": "KIF3B", "properties": { "url": "http://identifiers.org/ncbigene/9371", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "kinesin family member 3B" }, "metanode": "Gene" }, { "id": 11646, "identifier": "C0020492", "identifier_type": "str", "name": "Hyperostosis", "properties": { "url": "http://identifiers.org/umls/C0020492", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 11647, "identifier": "DB00954", "identifier_type": "str", "name": "Dirithromycin", "properties": { "url": "http://www.drugbank.ca/drugs/DB00954", "inchi": "InChI=1S/C42H78N2O14/c1-15-29-42(10,49)37-24(4)32(43-30(56-37)21-52-17-16-50-13)22(2)19-40(8,48)36(58-39-33(45)28(44(11)12)18-23(3)53-39)25(5)34(26(6)38(47)55-29)57-31-20-41(9,51-14)35(46)27(7)54-31/h22-37,39,43,45-46,48-49H,15-21H2,1-14H3/t22-,23-,24-,25-,26-,27+,28+,29-,30-,31+,32+,33-,34-,35+,36-,37+,39+,40-,41-,42-/m1/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=WLOHNSSYAXHWNR-PBIGORBISA-N" }, "metanode": "Compound" }, { "id": 11648, "identifier": "GO:1900195", "identifier_type": "str", "name": "positive regulation of oocyte maturation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1900195", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11649, "identifier": "C0266011", "identifier_type": "str", "name": "Supernumerary nipple", "properties": { "url": "http://identifiers.org/umls/C0266011", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 11650, "identifier": "GO:0021691", "identifier_type": "str", "name": "cerebellar Purkinje cell layer maturation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0021691", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11651, "identifier": "PC7_8681", "identifier_type": "str", "name": "Validated transcriptional targets of deltaNp63 isoforms", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 11652, "identifier": "GO:0042169", "identifier_type": "str", "name": "SH2 domain binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042169", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 11653, "identifier": "GO:0043588", "identifier_type": "str", "name": "skin development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043588", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11654, "identifier": "GO:2000855", "identifier_type": "str", "name": "regulation of mineralocorticoid secretion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000855", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11655, "identifier": "N0000181815", "identifier_type": "str", "name": "Sphingosine 1-Phosphate Receptor Modulators", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000181815", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Mechanism of Action" }, "metanode": "Pharmacologic Class" }, { "id": 11656, "identifier": "GO:0019477", "identifier_type": "str", "name": "L-lysine catabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0019477", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11657, "identifier": "29935", "identifier_type": "int", "name": "RPA4", "properties": { "url": "http://identifiers.org/ncbigene/29935", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "replication protein A4, 30kDa" }, "metanode": "Gene" }, { "id": 11658, "identifier": "10325", "identifier_type": "int", "name": "RRAGB", "properties": { "url": "http://identifiers.org/ncbigene/10325", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "Ras-related GTP binding B" }, "metanode": "Gene" }, { "id": 11659, "identifier": "GO:0060539", "identifier_type": "str", "name": "diaphragm development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0060539", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11660, "identifier": "GO:0031640", "identifier_type": "str", "name": "killing of cells of other organism", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0031640", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11661, "identifier": "GO:2000045", "identifier_type": "str", "name": "regulation of G1/S transition of mitotic cell cycle", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000045", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11662, "identifier": "C0549428", "identifier_type": "str", "name": "Nicotinic effects", "properties": { "url": "http://identifiers.org/umls/C0549428", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 11663, "identifier": "23753", "identifier_type": "int", "name": "SDF2L1", "properties": { "url": "http://identifiers.org/ncbigene/23753", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "stromal cell-derived factor 2-like 1" }, "metanode": "Gene" } ] }