Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=11700

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=11725",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=11675",
    "results": [
        {
            "id": 11688,
            "identifier": "10633",
            "identifier_type": "int",
            "name": "RASL10A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10633",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "RAS-like, family 10, member A"
            },
            "metanode": "Gene"
        },
        {
            "id": 11689,
            "identifier": "GO:0005942",
            "identifier_type": "str",
            "name": "phosphatidylinositol 3-kinase complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005942",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 11690,
            "identifier": "353355",
            "identifier_type": "int",
            "name": "ZNF233",
            "properties": {
                "url": "http://identifiers.org/ncbigene/353355",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 233"
            },
            "metanode": "Gene"
        },
        {
            "id": 11691,
            "identifier": "GO:0030228",
            "identifier_type": "str",
            "name": "lipoprotein particle receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030228",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 11692,
            "identifier": "4595",
            "identifier_type": "int",
            "name": "MUTYH",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4595",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "mutY homolog"
            },
            "metanode": "Gene"
        },
        {
            "id": 11693,
            "identifier": "GO:0021799",
            "identifier_type": "str",
            "name": "cerebral cortex radially oriented cell migration",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021799",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 11694,
            "identifier": "93664",
            "identifier_type": "int",
            "name": "CADPS2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/93664",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "Ca++-dependent secretion activator 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 11695,
            "identifier": "6920",
            "identifier_type": "int",
            "name": "TCEA3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6920",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "transcription elongation factor A (SII), 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 11696,
            "identifier": "UBERON:0001908",
            "identifier_type": "str",
            "name": "optic tract",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0001908",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D014795"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 11697,
            "identifier": "GO:0044849",
            "identifier_type": "str",
            "name": "estrous cycle",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0044849",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 11698,
            "identifier": "GO:0097680",
            "identifier_type": "str",
            "name": "double-strand break repair via classical nonhomologous end joining",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0097680",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 11699,
            "identifier": "55315",
            "identifier_type": "int",
            "name": "SLC29A3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55315",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "solute carrier family 29 (equilibrative nucleoside transporter), member 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 11700,
            "identifier": "64078",
            "identifier_type": "int",
            "name": "SLC28A3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/64078",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "solute carrier family 28 (concentrative nucleoside transporter), member 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 11701,
            "identifier": "GO:0010512",
            "identifier_type": "str",
            "name": "negative regulation of phosphatidylinositol biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010512",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 11702,
            "identifier": "GO:0034370",
            "identifier_type": "str",
            "name": "triglyceride-rich lipoprotein particle remodeling",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034370",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 11703,
            "identifier": "GO:0045920",
            "identifier_type": "str",
            "name": "negative regulation of exocytosis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045920",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 11704,
            "identifier": "125",
            "identifier_type": "int",
            "name": "ADH1B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/125",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "alcohol dehydrogenase 1B (class I), beta polypeptide"
            },
            "metanode": "Gene"
        },
        {
            "id": 11705,
            "identifier": "C0021847",
            "identifier_type": "str",
            "name": "Intestinal pseudo-obstruction",
            "properties": {
                "url": "http://identifiers.org/umls/C0021847",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 11706,
            "identifier": "51514",
            "identifier_type": "int",
            "name": "DTL",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51514",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "denticleless E3 ubiquitin protein ligase homolog (Drosophila)"
            },
            "metanode": "Gene"
        },
        {
            "id": 11707,
            "identifier": "C0151578",
            "identifier_type": "str",
            "name": "Creatinine increased",
            "properties": {
                "url": "http://identifiers.org/umls/C0151578",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 11708,
            "identifier": "GO:0016571",
            "identifier_type": "str",
            "name": "histone methylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016571",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 11709,
            "identifier": "DB06751",
            "identifier_type": "str",
            "name": "Drotaverine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB06751",
                "inchi": "InChI=1S/C24H31NO4/c1-5-26-21-10-9-17(14-22(21)27-6-2)13-20-19-16-24(29-8-4)23(28-7-3)15-18(19)11-12-25-20/h9-10,13-16,25H,5-8,11-12H2,1-4H3/b20-13-",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=OMFNSKIUKYOYRG-MOSHPQCFSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 11710,
            "identifier": "133522",
            "identifier_type": "int",
            "name": "PPARGC1B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/133522",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "peroxisome proliferator-activated receptor gamma, coactivator 1 beta"
            },
            "metanode": "Gene"
        },
        {
            "id": 11711,
            "identifier": "11213",
            "identifier_type": "int",
            "name": "IRAK3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/11213",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "interleukin-1 receptor-associated kinase 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 11712,
            "identifier": "2538",
            "identifier_type": "int",
            "name": "G6PC",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2538",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "glucose-6-phosphatase, catalytic subunit"
            },
            "metanode": "Gene"
        }
    ]
}