Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=11975
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=12000", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=11950", "results": [ { "id": 11966, "identifier": "GO:0010256", "identifier_type": "str", "name": "endomembrane system organization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0010256", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11967, "identifier": "23604", "identifier_type": "int", "name": "DAPK2", "properties": { "url": "http://identifiers.org/ncbigene/23604", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "death-associated protein kinase 2" }, "metanode": "Gene" }, { "id": 11968, "identifier": "GO:0005522", "identifier_type": "str", "name": "profilin binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005522", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 11969, "identifier": "PC7_6913", "identifier_type": "str", "name": "Regulation of nuclear SMAD2/3 signaling", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 11970, "identifier": "GO:0019012", "identifier_type": "str", "name": "virion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0019012", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 11971, "identifier": "84572", "identifier_type": "int", "name": "GNPTG", "properties": { "url": "http://identifiers.org/ncbigene/84572", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "N-acetylglucosamine-1-phosphate transferase, gamma subunit" }, "metanode": "Gene" }, { "id": 11972, "identifier": "245928", "identifier_type": "int", "name": "DEFB114", "properties": { "url": "http://identifiers.org/ncbigene/245928", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "defensin, beta 114" }, "metanode": "Gene" }, { "id": 11973, "identifier": "C0853893", "identifier_type": "str", "name": "Device interaction", "properties": { "url": "http://identifiers.org/umls/C0853893", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 11974, "identifier": "PC7_2950", "identifier_type": "str", "name": "DNA Repair", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 11975, "identifier": "102724908", "identifier_type": "int", "name": "LOC102724908", "properties": { "url": "http://identifiers.org/ncbigene/102724908", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "uncharacterized LOC102724908" }, "metanode": "Gene" }, { "id": 11976, "identifier": "257144", "identifier_type": "int", "name": "GCSAM", "properties": { "url": "http://identifiers.org/ncbigene/257144", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "germinal center-associated, signaling and motility" }, "metanode": "Gene" }, { "id": 11977, "identifier": "GO:0032593", "identifier_type": "str", "name": "insulin-responsive compartment", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032593", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 11978, "identifier": "9786", "identifier_type": "int", "name": "KIAA0586", "properties": { "url": "http://identifiers.org/ncbigene/9786", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "KIAA0586" }, "metanode": "Gene" }, { "id": 11979, "identifier": "GO:0032300", "identifier_type": "str", "name": "mismatch repair complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032300", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 11980, "identifier": "GO:0033539", "identifier_type": "str", "name": "fatty acid beta-oxidation using acyl-CoA dehydrogenase", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0033539", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11981, "identifier": "3620", "identifier_type": "int", "name": "IDO1", "properties": { "url": "http://identifiers.org/ncbigene/3620", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "indoleamine 2,3-dioxygenase 1" }, "metanode": "Gene" }, { "id": 11982, "identifier": "8287", "identifier_type": "int", "name": "USP9Y", "properties": { "url": "http://identifiers.org/ncbigene/8287", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "Y", "description": "ubiquitin specific peptidase 9, Y-linked" }, "metanode": "Gene" }, { "id": 11983, "identifier": "GO:0043293", "identifier_type": "str", "name": "apoptosome", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043293", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 11984, "identifier": "GO:0001172", "identifier_type": "str", "name": "transcription, RNA-templated", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0001172", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 11985, "identifier": "147694", "identifier_type": "int", "name": "ZNF548", "properties": { "url": "http://identifiers.org/ncbigene/147694", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "zinc finger protein 548" }, "metanode": "Gene" }, { "id": 11986, "identifier": "C0342892", "identifier_type": "str", "name": "Hypolipidaemia", "properties": { "url": "http://identifiers.org/umls/C0342892", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 11987, "identifier": "GO:0001075", "identifier_type": "str", "name": "transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0001075", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 11988, "identifier": "DOID:10811", "identifier_type": "str", "name": "nasal cavity cancer", "properties": { "url": "http://purl.obolibrary.org/obo/DOID_10811", "source": "Disease Ontology", "license": "CC BY 3.0" }, "metanode": "Disease" }, { "id": 11989, "identifier": "100506242", "identifier_type": "int", "name": "LOC100506242", "properties": { "url": "http://identifiers.org/ncbigene/100506242", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "GLLV3061" }, "metanode": "Gene" }, { "id": 11990, "identifier": "163747", "identifier_type": "int", "name": "C1orf177", "properties": { "url": "http://identifiers.org/ncbigene/163747", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "chromosome 1 open reading frame 177" }, "metanode": "Gene" } ] }