Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=12625

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=12650",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=12600",
    "results": [
        {
            "id": 12614,
            "identifier": "D016857",
            "identifier_type": "str",
            "name": "Hypocapnia",
            "properties": {
                "url": "http://identifiers.org/mesh/D016857",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 12615,
            "identifier": "DB01088",
            "identifier_type": "str",
            "name": "Iloprost",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01088",
                "inchi": "InChI=1S/C30H38O5/c1-3-4-10-21(2)27(31)16-15-25-26-18-22(17-24(26)19-28(25)32)11-8-9-14-30(34)35-20-29(33)23-12-6-5-7-13-23/h5-7,11-13,15-16,21,24-28,31-32H,8-10,14,17-20H2,1-2H3/b16-15+,22-11-",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=CZUMMMDKQYRZDP-JCAXBLPDSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 12616,
            "identifier": "GO:0045002",
            "identifier_type": "str",
            "name": "double-strand break repair via single-strand annealing",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045002",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 12617,
            "identifier": "54102",
            "identifier_type": "int",
            "name": "CLIC6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54102",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "21",
                "description": "chloride intracellular channel 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 12618,
            "identifier": "GO:0001826",
            "identifier_type": "str",
            "name": "inner cell mass cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0001826",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 12619,
            "identifier": "339779",
            "identifier_type": "int",
            "name": "PRR30",
            "properties": {
                "url": "http://identifiers.org/ncbigene/339779",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "proline rich 30"
            },
            "metanode": "Gene"
        },
        {
            "id": 12620,
            "identifier": "6405",
            "identifier_type": "int",
            "name": "SEMA3F",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6405",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F"
            },
            "metanode": "Gene"
        },
        {
            "id": 12621,
            "identifier": "65062",
            "identifier_type": "int",
            "name": "TMEM237",
            "properties": {
                "url": "http://identifiers.org/ncbigene/65062",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "transmembrane protein 237"
            },
            "metanode": "Gene"
        },
        {
            "id": 12622,
            "identifier": "101929927",
            "identifier_type": "int",
            "name": "LOC101929927",
            "properties": {
                "url": "http://identifiers.org/ncbigene/101929927",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "putative protein FAM90A16P/FAM90A17P"
            },
            "metanode": "Gene"
        },
        {
            "id": 12623,
            "identifier": "222068",
            "identifier_type": "int",
            "name": "TMED4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/222068",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "transmembrane emp24 protein transport domain containing 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 12624,
            "identifier": "GO:0008430",
            "identifier_type": "str",
            "name": "selenium binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008430",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 12625,
            "identifier": "1237",
            "identifier_type": "int",
            "name": "CCR8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1237",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "chemokine (C-C motif) receptor 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 12626,
            "identifier": "9728",
            "identifier_type": "int",
            "name": "SECISBP2L",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9728",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "SECIS binding protein 2-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 12627,
            "identifier": "51131",
            "identifier_type": "int",
            "name": "PHF11",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51131",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "PHD finger protein 11"
            },
            "metanode": "Gene"
        },
        {
            "id": 12628,
            "identifier": "GO:0021564",
            "identifier_type": "str",
            "name": "vagus nerve development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021564",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 12629,
            "identifier": "C0235025",
            "identifier_type": "str",
            "name": "Peripheral motor neuropathy",
            "properties": {
                "url": "http://identifiers.org/umls/C0235025",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 12630,
            "identifier": "DB08911",
            "identifier_type": "str",
            "name": "Trametinib",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB08911",
                "inchi": "InChI=1S/C26H23FIN5O4/c1-13-22-21(23(31(3)24(13)35)30-20-10-7-15(28)11-19(20)27)25(36)33(17-8-9-17)26(37)32(22)18-6-4-5-16(12-18)29-14(2)34/h4-7,10-12,17,30H,8-9H2,1-3H3,(H,29,34)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=LIRYPHYGHXZJBZ-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 12631,
            "identifier": "GO:0007227",
            "identifier_type": "str",
            "name": "signal transduction downstream of smoothened",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007227",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 12632,
            "identifier": "C0151846",
            "identifier_type": "str",
            "name": "Disorder periosteal",
            "properties": {
                "url": "http://identifiers.org/umls/C0151846",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 12633,
            "identifier": "3690",
            "identifier_type": "int",
            "name": "ITGB3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3690",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)"
            },
            "metanode": "Gene"
        },
        {
            "id": 12634,
            "identifier": "105373133",
            "identifier_type": "int",
            "name": "LOC105373133",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105373133",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "uncharacterized LOC105373133"
            },
            "metanode": "Gene"
        },
        {
            "id": 12635,
            "identifier": "9092",
            "identifier_type": "int",
            "name": "SART1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9092",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "squamous cell carcinoma antigen recognized by T cells"
            },
            "metanode": "Gene"
        },
        {
            "id": 12636,
            "identifier": "10554",
            "identifier_type": "int",
            "name": "AGPAT1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10554",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "1-acylglycerol-3-phosphate O-acyltransferase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 12637,
            "identifier": "2982",
            "identifier_type": "int",
            "name": "GUCY1A3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2982",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "guanylate cyclase 1, soluble, alpha 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 12638,
            "identifier": "C0014549",
            "identifier_type": "str",
            "name": "Grand mal convulsion",
            "properties": {
                "url": "http://identifiers.org/umls/C0014549",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        }
    ]
}