Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=13100

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=13125",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=13075",
    "results": [
        {
            "id": 13090,
            "identifier": "GO:0045545",
            "identifier_type": "str",
            "name": "syndecan binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045545",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 13091,
            "identifier": "64419",
            "identifier_type": "int",
            "name": "MTMR14",
            "properties": {
                "url": "http://identifiers.org/ncbigene/64419",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "myotubularin related protein 14"
            },
            "metanode": "Gene"
        },
        {
            "id": 13092,
            "identifier": "GO:0034365",
            "identifier_type": "str",
            "name": "discoidal high-density lipoprotein particle",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034365",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 13093,
            "identifier": "DB00875",
            "identifier_type": "str",
            "name": "Flupentixol",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00875",
                "inchi": "InChI=1S/C23H27F3N2OS/c24-23(25,26)17-7-8-22-20(16-17)18(19-4-1-2-6-21(19)30-22)5-3-9-27-10-12-28(13-11-27)14-15-29/h1-2,4-8,16,20,22,29H,3,9-15H2/b18-5-",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=DTTVNHWDONBIKE-DVZOWYKESA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 13094,
            "identifier": "594",
            "identifier_type": "int",
            "name": "BCKDHB",
            "properties": {
                "url": "http://identifiers.org/ncbigene/594",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "branched chain keto acid dehydrogenase E1, beta polypeptide"
            },
            "metanode": "Gene"
        },
        {
            "id": 13095,
            "identifier": "9101",
            "identifier_type": "int",
            "name": "USP8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9101",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "ubiquitin specific peptidase 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 13096,
            "identifier": "50488",
            "identifier_type": "int",
            "name": "MINK1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/50488",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "misshapen-like kinase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 13097,
            "identifier": "219865",
            "identifier_type": "int",
            "name": "OR8G5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/219865",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "olfactory receptor, family 8, subfamily G, member 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 13098,
            "identifier": "GO:0032278",
            "identifier_type": "str",
            "name": "positive regulation of gonadotropin secretion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032278",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13099,
            "identifier": "GO:0006600",
            "identifier_type": "str",
            "name": "creatine metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006600",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13100,
            "identifier": "UBERON:0001780",
            "identifier_type": "str",
            "name": "spinal nerve",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0001780",
                "bto_id": "BTO:0000870",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D013127"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 13101,
            "identifier": "57480",
            "identifier_type": "int",
            "name": "PLEKHG1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57480",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "pleckstrin homology domain containing, family G (with RhoGef domain) member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 13102,
            "identifier": "105372490",
            "identifier_type": "int",
            "name": "LOC105372490",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105372490",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "sialic acid-binding Ig-like lectin 14"
            },
            "metanode": "Gene"
        },
        {
            "id": 13103,
            "identifier": "C0234925",
            "identifier_type": "str",
            "name": "Oily skin",
            "properties": {
                "url": "http://identifiers.org/umls/C0234925",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 13104,
            "identifier": "51442",
            "identifier_type": "int",
            "name": "VGLL1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51442",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "vestigial-like family member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 13105,
            "identifier": "348110",
            "identifier_type": "int",
            "name": "ARPIN",
            "properties": {
                "url": "http://identifiers.org/ncbigene/348110",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "actin-related protein 2/3 complex inhibitor"
            },
            "metanode": "Gene"
        },
        {
            "id": 13106,
            "identifier": "GO:0001764",
            "identifier_type": "str",
            "name": "neuron migration",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0001764",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13107,
            "identifier": "23355",
            "identifier_type": "int",
            "name": "VPS8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23355",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "vacuolar protein sorting 8 homolog (S. cerevisiae)"
            },
            "metanode": "Gene"
        },
        {
            "id": 13108,
            "identifier": "C0344365",
            "identifier_type": "str",
            "name": "Incomplete bladder emptying",
            "properties": {
                "url": "http://identifiers.org/umls/C0344365",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 13109,
            "identifier": "GO:0046935",
            "identifier_type": "str",
            "name": "1-phosphatidylinositol-3-kinase regulator activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0046935",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 13110,
            "identifier": "GO:0043101",
            "identifier_type": "str",
            "name": "purine-containing compound salvage",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0043101",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13111,
            "identifier": "105369535",
            "identifier_type": "int",
            "name": "LOC105369535",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105369535",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "uncharacterized LOC105369535"
            },
            "metanode": "Gene"
        },
        {
            "id": 13112,
            "identifier": "PC7_6180",
            "identifier_type": "str",
            "name": "PLCG1 events in ERBB2 signaling",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 13113,
            "identifier": "6342",
            "identifier_type": "int",
            "name": "SCP2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6342",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "sterol carrier protein 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 13114,
            "identifier": "GO:0032759",
            "identifier_type": "str",
            "name": "positive regulation of TRAIL production",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032759",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}