Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=13200

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=13225",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=13175",
    "results": [
        {
            "id": 13190,
            "identifier": "81611",
            "identifier_type": "int",
            "name": "ANP32E",
            "properties": {
                "url": "http://identifiers.org/ncbigene/81611",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "acidic (leucine-rich) nuclear phosphoprotein 32 family, member E"
            },
            "metanode": "Gene"
        },
        {
            "id": 13191,
            "identifier": "284498",
            "identifier_type": "int",
            "name": "C1orf167",
            "properties": {
                "url": "http://identifiers.org/ncbigene/284498",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "chromosome 1 open reading frame 167"
            },
            "metanode": "Gene"
        },
        {
            "id": 13192,
            "identifier": "133688",
            "identifier_type": "int",
            "name": "UGT3A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/133688",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "UDP glycosyltransferase 3 family, polypeptide A1"
            },
            "metanode": "Gene"
        },
        {
            "id": 13193,
            "identifier": "C0035258",
            "identifier_type": "str",
            "name": "Restless legs syndrome",
            "properties": {
                "url": "http://identifiers.org/umls/C0035258",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 13194,
            "identifier": "DB01622",
            "identifier_type": "str",
            "name": "Thioproperazine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01622",
                "inchi": "InChI=1S/C22H30N4O2S2/c1-23(2)30(27,28)18-9-10-22-20(17-18)26(19-7-4-5-8-21(19)29-22)12-6-11-25-15-13-24(3)14-16-25/h4-5,7-10,17H,6,11-16H2,1-3H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=VZYCZNZBPPHOFY-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 13195,
            "identifier": "79968",
            "identifier_type": "int",
            "name": "WDR76",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79968",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "WD repeat domain 76"
            },
            "metanode": "Gene"
        },
        {
            "id": 13196,
            "identifier": "D009912",
            "identifier_type": "str",
            "name": "Oral Manifestations",
            "properties": {
                "url": "http://identifiers.org/mesh/D009912",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 13197,
            "identifier": "GO:0032137",
            "identifier_type": "str",
            "name": "guanine/thymine mispair binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032137",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 13198,
            "identifier": "GO:0019855",
            "identifier_type": "str",
            "name": "calcium channel inhibitor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0019855",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 13199,
            "identifier": "5213",
            "identifier_type": "int",
            "name": "PFKM",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5213",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "phosphofructokinase, muscle"
            },
            "metanode": "Gene"
        },
        {
            "id": 13200,
            "identifier": "GO:0055025",
            "identifier_type": "str",
            "name": "positive regulation of cardiac muscle tissue development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0055025",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13201,
            "identifier": "GO:0035250",
            "identifier_type": "str",
            "name": "UDP-galactosyltransferase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035250",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 13202,
            "identifier": "130497",
            "identifier_type": "int",
            "name": "OSR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/130497",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "odd-skipped related transciption factor 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 13203,
            "identifier": "112849",
            "identifier_type": "int",
            "name": "L3HYPDH",
            "properties": {
                "url": "http://identifiers.org/ncbigene/112849",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "L-3-hydroxyproline dehydratase (trans-)"
            },
            "metanode": "Gene"
        },
        {
            "id": 13204,
            "identifier": "23052",
            "identifier_type": "int",
            "name": "ENDOD1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23052",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "endonuclease domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 13205,
            "identifier": "9573",
            "identifier_type": "int",
            "name": "GDF3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9573",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "growth differentiation factor 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 13206,
            "identifier": "169166",
            "identifier_type": "int",
            "name": "SNX31",
            "properties": {
                "url": "http://identifiers.org/ncbigene/169166",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "sorting nexin 31"
            },
            "metanode": "Gene"
        },
        {
            "id": 13207,
            "identifier": "GO:0060260",
            "identifier_type": "str",
            "name": "regulation of transcription initiation from RNA polymerase II promoter",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060260",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13208,
            "identifier": "GO:0016820",
            "identifier_type": "str",
            "name": "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016820",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 13209,
            "identifier": "105369216",
            "identifier_type": "int",
            "name": "LOC105369216",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105369216",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "syncytin-2-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 13210,
            "identifier": "GO:1901338",
            "identifier_type": "str",
            "name": "catecholamine binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901338",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 13211,
            "identifier": "GO:0060995",
            "identifier_type": "str",
            "name": "cell-cell signaling involved in kidney development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060995",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13212,
            "identifier": "GO:0090091",
            "identifier_type": "str",
            "name": "positive regulation of extracellular matrix disassembly",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090091",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13213,
            "identifier": "56061",
            "identifier_type": "int",
            "name": "UBFD1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56061",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "ubiquitin family domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 13214,
            "identifier": "102724356",
            "identifier_type": "int",
            "name": "LOC102724356",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102724356",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "uncharacterized LOC102724356"
            },
            "metanode": "Gene"
        }
    ]
}