Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=13600
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=13625", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=13575", "results": [ { "id": 13591, "identifier": "10229", "identifier_type": "int", "name": "COQ7", "properties": { "url": "http://identifiers.org/ncbigene/10229", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "coenzyme Q7 homolog, ubiquinone (yeast)" }, "metanode": "Gene" }, { "id": 13592, "identifier": "GO:0000703", "identifier_type": "str", "name": "oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0000703", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 13593, "identifier": "105370909", "identifier_type": "int", "name": "LOC105370909", "properties": { "url": "http://identifiers.org/ncbigene/105370909", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "uncharacterized LOC105370909" }, "metanode": "Gene" }, { "id": 13594, "identifier": "GO:0034603", "identifier_type": "str", "name": "pyruvate dehydrogenase [NAD(P)+] activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0034603", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 13595, "identifier": "7478", "identifier_type": "int", "name": "WNT8A", "properties": { "url": "http://identifiers.org/ncbigene/7478", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "wingless-type MMTV integration site family, member 8A" }, "metanode": "Gene" }, { "id": 13596, "identifier": "284406", "identifier_type": "int", "name": "ZFP82", "properties": { "url": "http://identifiers.org/ncbigene/284406", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "ZFP82 zinc finger protein" }, "metanode": "Gene" }, { "id": 13597, "identifier": "4063", "identifier_type": "int", "name": "LY9", "properties": { "url": "http://identifiers.org/ncbigene/4063", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "lymphocyte antigen 9" }, "metanode": "Gene" }, { "id": 13598, "identifier": "8458", "identifier_type": "int", "name": "TTF2", "properties": { "url": "http://identifiers.org/ncbigene/8458", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "transcription termination factor, RNA polymerase II" }, "metanode": "Gene" }, { "id": 13599, "identifier": "GO:1901293", "identifier_type": "str", "name": "nucleoside phosphate biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1901293", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 13600, "identifier": "GO:0045838", "identifier_type": "str", "name": "positive regulation of membrane potential", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045838", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 13601, "identifier": "GO:0007614", "identifier_type": "str", "name": "short-term memory", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0007614", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 13602, "identifier": "10927", "identifier_type": "int", "name": "SPIN1", "properties": { "url": "http://identifiers.org/ncbigene/10927", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "spindlin 1" }, "metanode": "Gene" }, { "id": 13603, "identifier": "C0032227", "identifier_type": "str", "name": "Pleural effusion", "properties": { "url": "http://identifiers.org/umls/C0032227", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 13604, "identifier": "GO:2000322", "identifier_type": "str", "name": "regulation of glucocorticoid receptor signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000322", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 13605, "identifier": "GO:0070883", "identifier_type": "str", "name": "pre-miRNA binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0070883", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 13606, "identifier": "286499", "identifier_type": "int", "name": "FAM133A", "properties": { "url": "http://identifiers.org/ncbigene/286499", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "family with sequence similarity 133, member A" }, "metanode": "Gene" }, { "id": 13607, "identifier": "4745", "identifier_type": "int", "name": "NELL1", "properties": { "url": "http://identifiers.org/ncbigene/4745", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "NEL-like 1 (chicken)" }, "metanode": "Gene" }, { "id": 13608, "identifier": "C0151620", "identifier_type": "str", "name": "Hypertensive encephalopathy", "properties": { "url": "http://identifiers.org/umls/C0151620", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 13609, "identifier": "UBERON:0002107", "identifier_type": "str", "name": "liver", "properties": { "url": "http://purl.obolibrary.org/obo/UBERON_0002107", "bto_id": "BTO:0000759", "source": "Uberon", "license": "CC BY 3.0", "mesh_id": "D008099" }, "metanode": "Anatomy" }, { "id": 13610, "identifier": "C0521496", "identifier_type": "str", "name": "Application site infection", "properties": { "url": "http://identifiers.org/umls/C0521496", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 13611, "identifier": "GO:0060266", "identifier_type": "str", "name": "negative regulation of respiratory burst involved in inflammatory response", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0060266", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 13612, "identifier": "PC7_2012", "identifier_type": "str", "name": "BMP receptor signaling", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 13613, "identifier": "2046", "identifier_type": "int", "name": "EPHA8", "properties": { "url": "http://identifiers.org/ncbigene/2046", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "EPH receptor A8" }, "metanode": "Gene" }, { "id": 13614, "identifier": "55593", "identifier_type": "int", "name": "OTUD5", "properties": { "url": "http://identifiers.org/ncbigene/55593", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "OTU deubiquitinase 5" }, "metanode": "Gene" }, { "id": 13615, "identifier": "GO:0097342", "identifier_type": "str", "name": "ripoptosome", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0097342", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" } ] }