Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=13675
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=13700", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=13650", "results": [ { "id": 13666, "identifier": "65244", "identifier_type": "int", "name": "SPATS2", "properties": { "url": "http://identifiers.org/ncbigene/65244", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "spermatogenesis associated, serine-rich 2" }, "metanode": "Gene" }, { "id": 13667, "identifier": "102724904", "identifier_type": "int", "name": "LOC102724904", "properties": { "url": "http://identifiers.org/ncbigene/102724904", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "monofunctional C1-tetrahydrofolate synthase, mitochondrial-like" }, "metanode": "Gene" }, { "id": 13668, "identifier": "GO:0061377", "identifier_type": "str", "name": "mammary gland lobule development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0061377", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 13669, "identifier": "1163", "identifier_type": "int", "name": "CKS1B", "properties": { "url": "http://identifiers.org/ncbigene/1163", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "CDC28 protein kinase regulatory subunit 1B" }, "metanode": "Gene" }, { "id": 13670, "identifier": "9926", "identifier_type": "int", "name": "LPGAT1", "properties": { "url": "http://identifiers.org/ncbigene/9926", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "lysophosphatidylglycerol acyltransferase 1" }, "metanode": "Gene" }, { "id": 13671, "identifier": "C0003460", "identifier_type": "str", "name": "Anuria", "properties": { "url": "http://identifiers.org/umls/C0003460", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 13672, "identifier": "C0747256", "identifier_type": "str", "name": "Infection parasitic", "properties": { "url": "http://identifiers.org/umls/C0747256", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 13673, "identifier": "PC7_6000", "identifier_type": "str", "name": "O-linked glycosylation", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 13674, "identifier": "GO:1903034", "identifier_type": "str", "name": "regulation of response to wounding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903034", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 13675, "identifier": "GO:1900004", "identifier_type": "str", "name": "negative regulation of serine-type endopeptidase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1900004", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 13676, "identifier": "283871", "identifier_type": "int", "name": "PGP", "properties": { "url": "http://identifiers.org/ncbigene/283871", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "phosphoglycolate phosphatase" }, "metanode": "Gene" }, { "id": 13677, "identifier": "2117", "identifier_type": "int", "name": "ETV3", "properties": { "url": "http://identifiers.org/ncbigene/2117", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "ets variant 3" }, "metanode": "Gene" }, { "id": 13678, "identifier": "10736", "identifier_type": "int", "name": "SIX2", "properties": { "url": "http://identifiers.org/ncbigene/10736", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "SIX homeobox 2" }, "metanode": "Gene" }, { "id": 13679, "identifier": "30827", "identifier_type": "int", "name": "CXXC1", "properties": { "url": "http://identifiers.org/ncbigene/30827", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "18", "description": "CXXC finger protein 1" }, "metanode": "Gene" }, { "id": 13680, "identifier": "WP453_r80206", "identifier_type": "str", "name": "Inflammatory Response Pathway", "properties": { "url": "http://www.wikipathways.org/instance/WP453_r80206", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 13681, "identifier": "GO:0030833", "identifier_type": "str", "name": "regulation of actin filament polymerization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030833", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 13682, "identifier": "7644", "identifier_type": "int", "name": "ZNF91", "properties": { "url": "http://identifiers.org/ncbigene/7644", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "zinc finger protein 91" }, "metanode": "Gene" }, { "id": 13683, "identifier": "GO:0001147", "identifier_type": "str", "name": "transcription termination site sequence-specific DNA binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0001147", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 13684, "identifier": "C0239062", "identifier_type": "str", "name": "Circumoral oedema", "properties": { "url": "http://identifiers.org/umls/C0239062", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 13685, "identifier": "84892", "identifier_type": "int", "name": "POMGNT2", "properties": { "url": "http://identifiers.org/ncbigene/84892", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)" }, "metanode": "Gene" }, { "id": 13686, "identifier": "GO:0044224", "identifier_type": "str", "name": "juxtaparanode region of axon", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0044224", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 13687, "identifier": "WP391_r71373", "identifier_type": "str", "name": "Mitochondrial Gene Expression", "properties": { "url": "http://www.wikipathways.org/instance/WP391_r71373", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 13688, "identifier": "C0162291", "identifier_type": "str", "name": "Retinal ischaemia", "properties": { "url": "http://identifiers.org/umls/C0162291", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 13689, "identifier": "GO:0071600", "identifier_type": "str", "name": "otic vesicle morphogenesis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0071600", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 13690, "identifier": "GO:0048644", "identifier_type": "str", "name": "muscle organ morphogenesis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048644", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }