Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=13850

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=13875",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=13825",
    "results": [
        {
            "id": 13841,
            "identifier": "GO:0010771",
            "identifier_type": "str",
            "name": "negative regulation of cell morphogenesis involved in differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010771",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13842,
            "identifier": "GO:0090110",
            "identifier_type": "str",
            "name": "cargo loading into COPII-coated vesicle",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090110",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13843,
            "identifier": "151613",
            "identifier_type": "int",
            "name": "TTC14",
            "properties": {
                "url": "http://identifiers.org/ncbigene/151613",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "tetratricopeptide repeat domain 14"
            },
            "metanode": "Gene"
        },
        {
            "id": 13844,
            "identifier": "5027",
            "identifier_type": "int",
            "name": "P2RX7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5027",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "purinergic receptor P2X, ligand gated ion channel, 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 13845,
            "identifier": "GO:0035985",
            "identifier_type": "str",
            "name": "senescence-associated heterochromatin focus",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035985",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 13846,
            "identifier": "55049",
            "identifier_type": "int",
            "name": "C19orf60",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55049",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "chromosome 19 open reading frame 60"
            },
            "metanode": "Gene"
        },
        {
            "id": 13847,
            "identifier": "105372559",
            "identifier_type": "int",
            "name": "LOC105372559",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105372559",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "uncharacterized LOC105372559"
            },
            "metanode": "Gene"
        },
        {
            "id": 13848,
            "identifier": "23122",
            "identifier_type": "int",
            "name": "CLASP2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23122",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "cytoplasmic linker associated protein 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 13849,
            "identifier": "7480",
            "identifier_type": "int",
            "name": "WNT10B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7480",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "wingless-type MMTV integration site family, member 10B"
            },
            "metanode": "Gene"
        },
        {
            "id": 13850,
            "identifier": "DB08866",
            "identifier_type": "str",
            "name": "Estradiol valerate/Dienogest",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB08866",
                "inchi": "InChI=1S/C23H32O3.C20H25NO2/c1-3-4-5-22(25)26-21-11-10-20-19-8-6-15-14-16(24)7-9-17(15)18(19)12-13-23(20,21)2;1-19-8-6-16-15-5-3-14(22)12-13(15)2-4-17(16)18(19)7-9-20(19,23)10-11-21/h7,9,14,18-21,24H,3-6,8,10-13H2,1-2H3;12,17-18,23H,2-10H2,1H3/t18-,19-,20+,21+,23+;17-,18+,19+,20-/m11/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=LRHSUZNWLAJWRT-GAJBHWORSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 13851,
            "identifier": "100130817",
            "identifier_type": "int",
            "name": "LOC100130817",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100130817",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "uncharacterized LOC100130817"
            },
            "metanode": "Gene"
        },
        {
            "id": 13852,
            "identifier": "GO:0033059",
            "identifier_type": "str",
            "name": "cellular pigmentation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0033059",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13853,
            "identifier": "GO:0000782",
            "identifier_type": "str",
            "name": "telomere cap complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000782",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 13854,
            "identifier": "102724426",
            "identifier_type": "int",
            "name": "LOC102724426",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102724426",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "Sjoegren syndrome nuclear autoantigen 1 homolog"
            },
            "metanode": "Gene"
        },
        {
            "id": 13855,
            "identifier": "GO:0002027",
            "identifier_type": "str",
            "name": "regulation of heart rate",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002027",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13856,
            "identifier": "GO:0044295",
            "identifier_type": "str",
            "name": "axonal growth cone",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0044295",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 13857,
            "identifier": "GO:0035469",
            "identifier_type": "str",
            "name": "determination of pancreatic left/right asymmetry",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035469",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13858,
            "identifier": "59342",
            "identifier_type": "int",
            "name": "SCPEP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/59342",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "serine carboxypeptidase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 13859,
            "identifier": "GO:0070427",
            "identifier_type": "str",
            "name": "nucleotide-binding oligomerization domain containing 1 signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070427",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 13860,
            "identifier": "C0034013",
            "identifier_type": "str",
            "name": "Precocious puberty",
            "properties": {
                "url": "http://identifiers.org/umls/C0034013",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 13861,
            "identifier": "27159",
            "identifier_type": "int",
            "name": "CHIA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/27159",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "chitinase, acidic"
            },
            "metanode": "Gene"
        },
        {
            "id": 13862,
            "identifier": "57699",
            "identifier_type": "int",
            "name": "CPNE5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57699",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "copine V"
            },
            "metanode": "Gene"
        },
        {
            "id": 13863,
            "identifier": "83460",
            "identifier_type": "int",
            "name": "EMC6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/83460",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "ER membrane protein complex subunit 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 13864,
            "identifier": "5607",
            "identifier_type": "int",
            "name": "MAP2K5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5607",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "mitogen-activated protein kinase kinase 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 13865,
            "identifier": "51533",
            "identifier_type": "int",
            "name": "PHF7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51533",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "PHD finger protein 7"
            },
            "metanode": "Gene"
        }
    ]
}