Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=14150

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=14175",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=14125",
    "results": [
        {
            "id": 14140,
            "identifier": "168507",
            "identifier_type": "int",
            "name": "PKD1L1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/168507",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "polycystic kidney disease 1 like 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 14141,
            "identifier": "GO:0016675",
            "identifier_type": "str",
            "name": "oxidoreductase activity, acting on a heme group of donors",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016675",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 14142,
            "identifier": "GO:0071638",
            "identifier_type": "str",
            "name": "negative regulation of monocyte chemotactic protein-1 production",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071638",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14143,
            "identifier": "GO:0043043",
            "identifier_type": "str",
            "name": "peptide biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0043043",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14144,
            "identifier": "1727",
            "identifier_type": "int",
            "name": "CYB5R3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1727",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "cytochrome b5 reductase 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 14145,
            "identifier": "55530",
            "identifier_type": "int",
            "name": "SVOP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55530",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "SV2 related protein homolog (rat)"
            },
            "metanode": "Gene"
        },
        {
            "id": 14146,
            "identifier": "GO:0006896",
            "identifier_type": "str",
            "name": "Golgi to vacuole transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006896",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14147,
            "identifier": "GO:0051642",
            "identifier_type": "str",
            "name": "centrosome localization",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051642",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14148,
            "identifier": "100128274",
            "identifier_type": "int",
            "name": "LOC100128274",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100128274",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "putative p150"
            },
            "metanode": "Gene"
        },
        {
            "id": 14149,
            "identifier": "DB03147",
            "identifier_type": "str",
            "name": "Flavin adenine dinucleotide",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB03147",
                "inchi": "InChI=1S/C27H33N9O15P2/c1-10-3-12-13(4-11(10)2)35(24-18(32-12)25(42)34-27(43)33-24)5-14(37)19(39)15(38)6-48-52(44,45)51-53(46,47)49-7-16-20(40)21(41)26(50-16)36-9-31-17-22(28)29-8-30-23(17)36/h3-4,8-9,14-16,19-21,26,37-41H,5-7H2,1-2H3,(H,44,45)(H,46,47)(H2,28,29,30)(H,34,42,43)/t14-,15+,16+,19-,20+,21+,26+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=VWWQXMAJTJZDQX-UYBVJOGSSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 14150,
            "identifier": "212",
            "identifier_type": "int",
            "name": "ALAS2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/212",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "5'-aminolevulinate synthase 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 14151,
            "identifier": "GO:0035061",
            "identifier_type": "str",
            "name": "interchromatin granule",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035061",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 14152,
            "identifier": "PC7_3972",
            "identifier_type": "str",
            "name": "Formation of the ternary complex, and subsequently, the 43S complex",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 14153,
            "identifier": "389602",
            "identifier_type": "int",
            "name": "LOC389602",
            "properties": {
                "url": "http://identifiers.org/ncbigene/389602",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "uncharacterized LOC389602"
            },
            "metanode": "Gene"
        },
        {
            "id": 14154,
            "identifier": "C1096448",
            "identifier_type": "str",
            "name": "Bronchopneumopathy",
            "properties": {
                "url": "http://identifiers.org/umls/C1096448",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 14155,
            "identifier": "GO:0071354",
            "identifier_type": "str",
            "name": "cellular response to interleukin-6",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071354",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14156,
            "identifier": "26686",
            "identifier_type": "int",
            "name": "OR4E2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/26686",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "olfactory receptor, family 4, subfamily E, member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 14157,
            "identifier": "DB01438",
            "identifier_type": "str",
            "name": "Phenazopyridine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01438",
                "inchi": "InChI=1S/C11H11N5/c12-10-7-6-9(11(13)14-10)16-15-8-4-2-1-3-5-8/h1-7H,(H4,12,13,14)/b16-15+",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=QPFYXYFORQJZEC-FOCLMDBBSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 14158,
            "identifier": "11172",
            "identifier_type": "int",
            "name": "INSL6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/11172",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "insulin-like 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 14159,
            "identifier": "91750",
            "identifier_type": "int",
            "name": "LIN52",
            "properties": {
                "url": "http://identifiers.org/ncbigene/91750",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "lin-52 DREAM MuvB core complex component"
            },
            "metanode": "Gene"
        },
        {
            "id": 14160,
            "identifier": "GO:0035509",
            "identifier_type": "str",
            "name": "negative regulation of myosin-light-chain-phosphatase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035509",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14161,
            "identifier": "PC7_3349",
            "identifier_type": "str",
            "name": "Dual incision reaction in TC-NER",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 14162,
            "identifier": "GO:0070613",
            "identifier_type": "str",
            "name": "regulation of protein processing",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070613",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14163,
            "identifier": "C1704431",
            "identifier_type": "str",
            "name": "Electrolyte disturbance",
            "properties": {
                "url": "http://identifiers.org/umls/C1704431",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 14164,
            "identifier": "55156",
            "identifier_type": "int",
            "name": "ARMC1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55156",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "armadillo repeat containing 1"
            },
            "metanode": "Gene"
        }
    ]
}