Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=14725

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=14750",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=14700",
    "results": [
        {
            "id": 14716,
            "identifier": "DB00565",
            "identifier_type": "str",
            "name": "Cisatracurium Besylate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00565",
                "inchi": "InChI=1S/C53H72N2O12.2C6H6O3S/c1-54(22-18-38-32-48(62-7)50(64-9)34-40(38)42(54)28-36-14-16-44(58-3)46(30-36)60-5)24-20-52(56)66-26-12-11-13-27-67-53(57)21-25-55(2)23-19-39-33-49(63-8)51(65-10)35-41(39)43(55)29-37-15-17-45(59-4)47(31-37)61-6;2*7-10(8,9)6-4-2-1-3-5-6/h14-17,30-35,42-43H,11-13,18-29H2,1-10H3;2*1-5H,(H,7,8,9)/q+2;;/p-2/t42-,43-,54-,55-;;/m1../s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=XXZSQOVSEBAPGS-DONVQRBFSA-L"
            },
            "metanode": "Compound"
        },
        {
            "id": 14717,
            "identifier": "116113",
            "identifier_type": "int",
            "name": "FOXP4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/116113",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "forkhead box P4"
            },
            "metanode": "Gene"
        },
        {
            "id": 14718,
            "identifier": "285362",
            "identifier_type": "int",
            "name": "SUMF1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/285362",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "sulfatase modifying factor 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 14719,
            "identifier": "GO:0006275",
            "identifier_type": "str",
            "name": "regulation of DNA replication",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006275",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14720,
            "identifier": "7704",
            "identifier_type": "int",
            "name": "ZBTB16",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7704",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "zinc finger and BTB domain containing 16"
            },
            "metanode": "Gene"
        },
        {
            "id": 14721,
            "identifier": "GO:0035385",
            "identifier_type": "str",
            "name": "Roundabout signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035385",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14722,
            "identifier": "GO:0051901",
            "identifier_type": "str",
            "name": "positive regulation of mitochondrial depolarization",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051901",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14723,
            "identifier": "84186",
            "identifier_type": "int",
            "name": "ZCCHC7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84186",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "zinc finger, CCHC domain containing 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 14724,
            "identifier": "GO:0010994",
            "identifier_type": "str",
            "name": "free ubiquitin chain polymerization",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010994",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14725,
            "identifier": "56099",
            "identifier_type": "int",
            "name": "PCDHGB7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56099",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "protocadherin gamma subfamily B, 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 14726,
            "identifier": "C0018784",
            "identifier_type": "str",
            "name": "Deafness neurosensory",
            "properties": {
                "url": "http://identifiers.org/umls/C0018784",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 14727,
            "identifier": "GO:0042495",
            "identifier_type": "str",
            "name": "detection of triacyl bacterial lipopeptide",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0042495",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14728,
            "identifier": "101929599",
            "identifier_type": "int",
            "name": "LOC101929599",
            "properties": {
                "url": "http://identifiers.org/ncbigene/101929599",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "putative POM121-like protein 1-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 14729,
            "identifier": "79632",
            "identifier_type": "int",
            "name": "FAM184A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79632",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "family with sequence similarity 184, member A"
            },
            "metanode": "Gene"
        },
        {
            "id": 14730,
            "identifier": "387718",
            "identifier_type": "int",
            "name": "TEX36",
            "properties": {
                "url": "http://identifiers.org/ncbigene/387718",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "testis expressed 36"
            },
            "metanode": "Gene"
        },
        {
            "id": 14731,
            "identifier": "781",
            "identifier_type": "int",
            "name": "CACNA2D1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/781",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "calcium channel, voltage-dependent, alpha 2/delta subunit 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 14732,
            "identifier": "9400",
            "identifier_type": "int",
            "name": "RECQL5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9400",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "RecQ protein-like 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 14733,
            "identifier": "C1263855",
            "identifier_type": "str",
            "name": "Lumbar radiculopathy",
            "properties": {
                "url": "http://identifiers.org/umls/C1263855",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 14734,
            "identifier": "GO:0034767",
            "identifier_type": "str",
            "name": "positive regulation of ion transmembrane transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034767",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14735,
            "identifier": "C0151526",
            "identifier_type": "str",
            "name": "Premature delivery",
            "properties": {
                "url": "http://identifiers.org/umls/C0151526",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 14736,
            "identifier": "GO:0033238",
            "identifier_type": "str",
            "name": "regulation of cellular amine metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0033238",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14737,
            "identifier": "GO:0097401",
            "identifier_type": "str",
            "name": "synaptic vesicle lumen acidification",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0097401",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 14738,
            "identifier": "3234",
            "identifier_type": "int",
            "name": "HOXD8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3234",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "homeobox D8"
            },
            "metanode": "Gene"
        },
        {
            "id": 14739,
            "identifier": "5831",
            "identifier_type": "int",
            "name": "PYCR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5831",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "pyrroline-5-carboxylate reductase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 14740,
            "identifier": "51629",
            "identifier_type": "int",
            "name": "SLC25A39",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51629",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "solute carrier family 25, member 39"
            },
            "metanode": "Gene"
        }
    ]
}