Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=150

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=175",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=125",
    "results": [
        {
            "id": 149,
            "identifier": "10197",
            "identifier_type": "int",
            "name": "PSME3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10197",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)"
            },
            "metanode": "Gene"
        },
        {
            "id": 150,
            "identifier": "652968",
            "identifier_type": "int",
            "name": "GATSL3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/652968",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "GATS protein-like 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 151,
            "identifier": "3903",
            "identifier_type": "int",
            "name": "LAIR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3903",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "leukocyte-associated immunoglobulin-like receptor 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 152,
            "identifier": "8554",
            "identifier_type": "int",
            "name": "PIAS1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8554",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "protein inhibitor of activated STAT, 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 153,
            "identifier": "GO:0032357",
            "identifier_type": "str",
            "name": "oxidized purine DNA binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032357",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 154,
            "identifier": "GO:0019958",
            "identifier_type": "str",
            "name": "C-X-C chemokine binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0019958",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 155,
            "identifier": "GO:0021836",
            "identifier_type": "str",
            "name": "chemorepulsion involved in postnatal olfactory bulb interneuron migration",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021836",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 156,
            "identifier": "PC7_6569",
            "identifier_type": "str",
            "name": "Presenilin action in Notch and Wnt signaling",
            "properties": {
                "source": "PID via Pathway Commons",
                "license": "CC0 1.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 157,
            "identifier": "GO:1904590",
            "identifier_type": "str",
            "name": "negative regulation of protein import",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904590",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 158,
            "identifier": "4841",
            "identifier_type": "int",
            "name": "NONO",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4841",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "non-POU domain containing, octamer-binding"
            },
            "metanode": "Gene"
        },
        {
            "id": 159,
            "identifier": "GO:0018904",
            "identifier_type": "str",
            "name": "ether metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0018904",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 160,
            "identifier": "54879",
            "identifier_type": "int",
            "name": "ST7L",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54879",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "suppression of tumorigenicity 7 like"
            },
            "metanode": "Gene"
        },
        {
            "id": 161,
            "identifier": "100132146",
            "identifier_type": "int",
            "name": "LOC100132146",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100132146",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "uncharacterized LOC100132146"
            },
            "metanode": "Gene"
        },
        {
            "id": 162,
            "identifier": "GO:0070316",
            "identifier_type": "str",
            "name": "regulation of G0 to G1 transition",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070316",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 163,
            "identifier": "162515",
            "identifier_type": "int",
            "name": "SLC16A11",
            "properties": {
                "url": "http://identifiers.org/ncbigene/162515",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "solute carrier family 16, member 11"
            },
            "metanode": "Gene"
        },
        {
            "id": 164,
            "identifier": "7182",
            "identifier_type": "int",
            "name": "NR2C2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7182",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "nuclear receptor subfamily 2, group C, member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 165,
            "identifier": "C0220854",
            "identifier_type": "str",
            "name": "Hyperpnea",
            "properties": {
                "url": "http://identifiers.org/umls/C0220854",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 166,
            "identifier": "57332",
            "identifier_type": "int",
            "name": "CBX8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57332",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "chromobox homolog 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 167,
            "identifier": "DB06589",
            "identifier_type": "str",
            "name": "Pazopanib",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB06589",
                "inchi": "InChI=1S/C21H23N7O2S/c1-13-5-6-15(11-19(13)31(22,29)30)24-21-23-10-9-20(25-21)27(3)16-7-8-17-14(2)28(4)26-18(17)12-16/h5-12H,1-4H3,(H2,22,29,30)(H,23,24,25)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=CUIHSIWYWATEQL-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 168,
            "identifier": "4354",
            "identifier_type": "int",
            "name": "MPP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4354",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "membrane protein, palmitoylated 1, 55kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 169,
            "identifier": "C0235031",
            "identifier_type": "str",
            "name": "Neurological symptom",
            "properties": {
                "url": "http://identifiers.org/umls/C0235031",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 170,
            "identifier": "388951",
            "identifier_type": "int",
            "name": "TSPYL6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/388951",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "TSPY-like 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 171,
            "identifier": "GO:1901205",
            "identifier_type": "str",
            "name": "negative regulation of adrenergic receptor signaling pathway involved in heart process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901205",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 172,
            "identifier": "26019",
            "identifier_type": "int",
            "name": "UPF2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/26019",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "UPF2 regulator of nonsense transcripts homolog (yeast)"
            },
            "metanode": "Gene"
        },
        {
            "id": 173,
            "identifier": "2014",
            "identifier_type": "int",
            "name": "EMP3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2014",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "epithelial membrane protein 3"
            },
            "metanode": "Gene"
        }
    ]
}