Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=15150
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=15175", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=15125", "results": [ { "id": 15140, "identifier": "7508", "identifier_type": "int", "name": "XPC", "properties": { "url": "http://identifiers.org/ncbigene/7508", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "xeroderma pigmentosum, complementation group C" }, "metanode": "Gene" }, { "id": 15141, "identifier": "C0023518", "identifier_type": "str", "name": "Leukocytosis", "properties": { "url": "http://identifiers.org/umls/C0023518", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 15142, "identifier": "PC7_4819", "identifier_type": "str", "name": "JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 15143, "identifier": "642658", "identifier_type": "int", "name": "SCX", "properties": { "url": "http://identifiers.org/ncbigene/642658", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "scleraxis basic helix-loop-helix transcription factor" }, "metanode": "Gene" }, { "id": 15144, "identifier": "GO:1900116", "identifier_type": "str", "name": "extracellular negative regulation of signal transduction", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1900116", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 15145, "identifier": "5870", "identifier_type": "int", "name": "RAB6A", "properties": { "url": "http://identifiers.org/ncbigene/5870", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "RAB6A, member RAS oncogene family" }, "metanode": "Gene" }, { "id": 15146, "identifier": "GO:0005112", "identifier_type": "str", "name": "Notch binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005112", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 15147, "identifier": "GO:0009624", "identifier_type": "str", "name": "response to nematode", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0009624", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 15148, "identifier": "9204", "identifier_type": "int", "name": "ZMYM6", "properties": { "url": "http://identifiers.org/ncbigene/9204", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "zinc finger, MYM-type 6" }, "metanode": "Gene" }, { "id": 15149, "identifier": "C0858950", "identifier_type": "str", "name": "Mental aberration", "properties": { "url": "http://identifiers.org/umls/C0858950", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 15150, "identifier": "54454", "identifier_type": "int", "name": "ATAD2B", "properties": { "url": "http://identifiers.org/ncbigene/54454", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "ATPase family, AAA domain containing 2B" }, "metanode": "Gene" }, { "id": 15151, "identifier": "81889", "identifier_type": "int", "name": "FAHD1", "properties": { "url": "http://identifiers.org/ncbigene/81889", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "fumarylacetoacetate hydrolase domain containing 1" }, "metanode": "Gene" }, { "id": 15152, "identifier": "GO:0047134", "identifier_type": "str", "name": "protein-disulfide reductase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0047134", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 15153, "identifier": "WP313_r79946", "identifier_type": "str", "name": "Signaling of Hepatocyte Growth Factor Receptor", "properties": { "url": "http://www.wikipathways.org/instance/WP313_r79946", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 15154, "identifier": "GO:0016005", "identifier_type": "str", "name": "phospholipase A2 activator activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0016005", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 15155, "identifier": "GO:2000466", "identifier_type": "str", "name": "negative regulation of glycogen (starch) synthase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000466", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 15156, "identifier": "3038", "identifier_type": "int", "name": "HAS3", "properties": { "url": "http://identifiers.org/ncbigene/3038", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "hyaluronan synthase 3" }, "metanode": "Gene" }, { "id": 15157, "identifier": "D007040", "identifier_type": "str", "name": "Hypoventilation", "properties": { "url": "http://identifiers.org/mesh/D007040", "source": "MeSH", "license": "CC0 1.0" }, "metanode": "Symptom" }, { "id": 15158, "identifier": "57599", "identifier_type": "int", "name": "WDR48", "properties": { "url": "http://identifiers.org/ncbigene/57599", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "WD repeat domain 48" }, "metanode": "Gene" }, { "id": 15159, "identifier": "PC7_5875", "identifier_type": "str", "name": "Negative epigenetic regulation of rRNA expression", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 15160, "identifier": "GO:0036233", "identifier_type": "str", "name": "glycine import", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0036233", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 15161, "identifier": "GO:0006646", "identifier_type": "str", "name": "phosphatidylethanolamine biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006646", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 15162, "identifier": "D018496", "identifier_type": "str", "name": "Hyperoxia", "properties": { "url": "http://identifiers.org/mesh/D018496", "source": "MeSH", "license": "CC0 1.0" }, "metanode": "Symptom" }, { "id": 15163, "identifier": "116225", "identifier_type": "int", "name": "ZMYND19", "properties": { "url": "http://identifiers.org/ncbigene/116225", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "zinc finger, MYND-type containing 19" }, "metanode": "Gene" }, { "id": 15164, "identifier": "375287", "identifier_type": "int", "name": "RBM43", "properties": { "url": "http://identifiers.org/ncbigene/375287", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "RNA binding motif protein 43" }, "metanode": "Gene" } ] }