Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=15375
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=15400", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=15350", "results": [ { "id": 15365, "identifier": "79718", "identifier_type": "int", "name": "TBL1XR1", "properties": { "url": "http://identifiers.org/ncbigene/79718", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "transducin (beta)-like 1 X-linked receptor 1" }, "metanode": "Gene" }, { "id": 15366, "identifier": "9358", "identifier_type": "int", "name": "ITGBL1", "properties": { "url": "http://identifiers.org/ncbigene/9358", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "13", "description": "integrin, beta-like 1 (with EGF-like repeat domains)" }, "metanode": "Gene" }, { "id": 15367, "identifier": "GO:0061647", "identifier_type": "str", "name": "histone H3-K9 modification", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0061647", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 15368, "identifier": "WP170_r71083", "identifier_type": "str", "name": "Nuclear Receptors", "properties": { "url": "http://www.wikipathways.org/instance/WP170_r71083", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 15369, "identifier": "GO:0019919", "identifier_type": "str", "name": "peptidyl-arginine methylation, to asymmetrical-dimethyl arginine", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0019919", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 15370, "identifier": "C0687675", "identifier_type": "str", "name": "Pregnancy loss", "properties": { "url": "http://identifiers.org/umls/C0687675", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 15371, "identifier": "3304", "identifier_type": "int", "name": "HSPA1B", "properties": { "url": "http://identifiers.org/ncbigene/3304", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "heat shock 70kDa protein 1B" }, "metanode": "Gene" }, { "id": 15372, "identifier": "GO:0045214", "identifier_type": "str", "name": "sarcomere organization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045214", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 15373, "identifier": "GO:0030163", "identifier_type": "str", "name": "protein catabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030163", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 15374, "identifier": "29906", "identifier_type": "int", "name": "ST8SIA5", "properties": { "url": "http://identifiers.org/ncbigene/29906", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "18", "description": "ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5" }, "metanode": "Gene" }, { "id": 15375, "identifier": "5645", "identifier_type": "int", "name": "PRSS2", "properties": { "url": "http://identifiers.org/ncbigene/5645", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "protease, serine, 2 (trypsin 2)" }, "metanode": "Gene" }, { "id": 15376, "identifier": "51699", "identifier_type": "int", "name": "VPS29", "properties": { "url": "http://identifiers.org/ncbigene/51699", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "vacuolar protein sorting 29 homolog (S. cerevisiae)" }, "metanode": "Gene" }, { "id": 15377, "identifier": "DB00292", "identifier_type": "str", "name": "Etomidate", "properties": { "url": "http://www.drugbank.ca/drugs/DB00292", "inchi": "InChI=1S/C14H16N2O2/c1-3-18-14(17)13-9-15-10-16(13)11(2)12-7-5-4-6-8-12/h4-11H,3H2,1-2H3/t11-/m1/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=NPUKDXXFDDZOKR-LLVKDONJSA-N" }, "metanode": "Compound" }, { "id": 15378, "identifier": "C0422980", "identifier_type": "str", "name": "Oscillopsia", "properties": { "url": "http://identifiers.org/umls/C0422980", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 15379, "identifier": "PC7_8288", "identifier_type": "str", "name": "Toll Like Receptor 4 (TLR4) Cascade", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 15380, "identifier": "GO:0044068", "identifier_type": "str", "name": "modulation by symbiont of host cellular process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0044068", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 15381, "identifier": "C0268000", "identifier_type": "str", "name": "Fluid retention", "properties": { "url": "http://identifiers.org/umls/C0268000", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 15382, "identifier": "GO:1903039", "identifier_type": "str", "name": "positive regulation of leukocyte cell-cell adhesion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903039", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 15383, "identifier": "139170", "identifier_type": "int", "name": "DCAF12L1", "properties": { "url": "http://identifiers.org/ncbigene/139170", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "DDB1 and CUL4 associated factor 12-like 1" }, "metanode": "Gene" }, { "id": 15384, "identifier": "DB01037", "identifier_type": "str", "name": "Selegiline", "properties": { "url": "http://www.drugbank.ca/drugs/DB01037", "inchi": "InChI=1S/C13H17N/c1-4-10-14(3)12(2)11-13-8-6-5-7-9-13/h1,5-9,12H,10-11H2,2-3H3", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=MEZLKOACVSPNER-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 15385, "identifier": "245936", "identifier_type": "int", "name": "DEFB123", "properties": { "url": "http://identifiers.org/ncbigene/245936", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "defensin, beta 123" }, "metanode": "Gene" }, { "id": 15386, "identifier": "C0013384", "identifier_type": "str", "name": "Dyskinesia", "properties": { "url": "http://identifiers.org/umls/C0013384", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 15387, "identifier": "C0270629", "identifier_type": "str", "name": "Extradural abscess", "properties": { "url": "http://identifiers.org/umls/C0270629", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 15388, "identifier": "6599", "identifier_type": "int", "name": "SMARCC1", "properties": { "url": "http://identifiers.org/ncbigene/6599", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1" }, "metanode": "Gene" }, { "id": 15389, "identifier": "C1142498", "identifier_type": "str", "name": "Application site excoriation", "properties": { "url": "http://identifiers.org/umls/C1142498", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" } ] }