Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=16450

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=16475",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=16425",
    "results": [
        {
            "id": 16441,
            "identifier": "GO:0019509",
            "identifier_type": "str",
            "name": "L-methionine biosynthetic process from methylthioadenosine",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0019509",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 16442,
            "identifier": "2055",
            "identifier_type": "int",
            "name": "CLN8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2055",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "ceroid-lipofuscinosis, neuronal 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 16443,
            "identifier": "GO:0002428",
            "identifier_type": "str",
            "name": "antigen processing and presentation of peptide antigen via MHC class Ib",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002428",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 16444,
            "identifier": "GO:0001189",
            "identifier_type": "str",
            "name": "RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0001189",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 16445,
            "identifier": "91252",
            "identifier_type": "int",
            "name": "SLC39A13",
            "properties": {
                "url": "http://identifiers.org/ncbigene/91252",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "solute carrier family 39 (zinc transporter), member 13"
            },
            "metanode": "Gene"
        },
        {
            "id": 16481,
            "identifier": "GO:0004969",
            "identifier_type": "str",
            "name": "histamine receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004969",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 16446,
            "identifier": "DB00902",
            "identifier_type": "str",
            "name": "Methdilazine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00902",
                "inchi": "InChI=1S/C18H20N2S/c1-19-11-10-14(12-19)13-20-15-6-2-4-8-17(15)21-18-9-5-3-7-16(18)20/h2-9,14H,10-13H2,1H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=HTMIBDQKFHUPSX-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 16447,
            "identifier": "337882",
            "identifier_type": "int",
            "name": "KRTAP19-1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/337882",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "21",
                "description": "keratin associated protein 19-1"
            },
            "metanode": "Gene"
        },
        {
            "id": 16448,
            "identifier": "286262",
            "identifier_type": "int",
            "name": "TPRN",
            "properties": {
                "url": "http://identifiers.org/ncbigene/286262",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "taperin"
            },
            "metanode": "Gene"
        },
        {
            "id": 16449,
            "identifier": "4508",
            "identifier_type": "int",
            "name": "ATP6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4508",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "MT",
                "description": "ATP synthase F0 subunit 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 16450,
            "identifier": "GO:0007569",
            "identifier_type": "str",
            "name": "cell aging",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007569",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 16451,
            "identifier": "GO:0061502",
            "identifier_type": "str",
            "name": "early endosome to recycling endosome transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0061502",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 16452,
            "identifier": "100132069",
            "identifier_type": "int",
            "name": "LOC100132069",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100132069",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "uncharacterized LOC100132069"
            },
            "metanode": "Gene"
        },
        {
            "id": 16453,
            "identifier": "C1167870",
            "identifier_type": "str",
            "name": "Graft dysfunction",
            "properties": {
                "url": "http://identifiers.org/umls/C1167870",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 16454,
            "identifier": "PC7_4874",
            "identifier_type": "str",
            "name": "Keratan sulfate biosynthesis",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 16455,
            "identifier": "DB00413",
            "identifier_type": "str",
            "name": "Pramipexole",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00413",
                "inchi": "InChI=1S/C10H17N3S/c1-2-5-12-7-3-4-8-9(6-7)14-10(11)13-8/h7,12H,2-6H2,1H3,(H2,11,13)/t7-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=FASDKYOPVNHBLU-ZETCQYMHSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 16456,
            "identifier": "DB01039",
            "identifier_type": "str",
            "name": "Fenofibrate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01039",
                "inchi": "InChI=1S/C20H21ClO4/c1-13(2)24-19(23)20(3,4)25-17-11-7-15(8-12-17)18(22)14-5-9-16(21)10-6-14/h5-13H,1-4H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=YMTINGFKWWXKFG-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 16457,
            "identifier": "GO:0003887",
            "identifier_type": "str",
            "name": "DNA-directed DNA polymerase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0003887",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 16458,
            "identifier": "C0043515",
            "identifier_type": "str",
            "name": "Zollinger-Ellison syndrome",
            "properties": {
                "url": "http://identifiers.org/umls/C0043515",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 16459,
            "identifier": "C0333650",
            "identifier_type": "str",
            "name": "Fat atrophy",
            "properties": {
                "url": "http://identifiers.org/umls/C0333650",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 16460,
            "identifier": "388730",
            "identifier_type": "int",
            "name": "TMEM81",
            "properties": {
                "url": "http://identifiers.org/ncbigene/388730",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "transmembrane protein 81"
            },
            "metanode": "Gene"
        },
        {
            "id": 16461,
            "identifier": "25942",
            "identifier_type": "int",
            "name": "SIN3A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/25942",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "SIN3 transcription regulator family member A"
            },
            "metanode": "Gene"
        },
        {
            "id": 16462,
            "identifier": "D005414",
            "identifier_type": "str",
            "name": "Flatulence",
            "properties": {
                "url": "http://identifiers.org/mesh/D005414",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 16463,
            "identifier": "55356",
            "identifier_type": "int",
            "name": "SLC22A15",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55356",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "solute carrier family 22, member 15"
            },
            "metanode": "Gene"
        },
        {
            "id": 16464,
            "identifier": "DB06288",
            "identifier_type": "str",
            "name": "Amisulpride",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB06288",
                "inchi": "InChI=1S/C17H27N3O4S/c1-4-20-8-6-7-12(20)11-19-17(21)13-9-16(25(22,23)5-2)14(18)10-15(13)24-3/h9-10,12H,4-8,11,18H2,1-3H3,(H,19,21)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=NTJOBXMMWNYJFB-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        }
    ]
}