Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=16725

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=16750",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=16700",
    "results": [
        {
            "id": 16717,
            "identifier": "GO:0098531",
            "identifier_type": "str",
            "name": "transcription factor activity, direct ligand regulated sequence-specific DNA binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0098531",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 16718,
            "identifier": "51604",
            "identifier_type": "int",
            "name": "PIGT",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51604",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "phosphatidylinositol glycan anchor biosynthesis, class T"
            },
            "metanode": "Gene"
        },
        {
            "id": 16719,
            "identifier": "DB01180",
            "identifier_type": "str",
            "name": "Rescinnamine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01180",
                "inchi": "InChI=1S/C35H42N2O9/c1-40-21-8-9-22-23-11-12-37-18-20-15-29(46-30(38)10-7-19-13-27(41-2)33(43-4)28(14-19)42-3)34(44-5)31(35(39)45-6)24(20)17-26(37)32(23)36-25(22)16-21/h7-10,13-14,16,20,24,26,29,31,34,36H,11-12,15,17-18H2,1-6H3/b10-7+/t20-,24+,26-,29-,31+,34+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=SZLZWPPUNLXJEA-QEGASFHISA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 16720,
            "identifier": "116540",
            "identifier_type": "int",
            "name": "MRPL53",
            "properties": {
                "url": "http://identifiers.org/ncbigene/116540",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "mitochondrial ribosomal protein L53"
            },
            "metanode": "Gene"
        },
        {
            "id": 16721,
            "identifier": "GO:0043255",
            "identifier_type": "str",
            "name": "regulation of carbohydrate biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0043255",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 16722,
            "identifier": "4163",
            "identifier_type": "int",
            "name": "MCC",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4163",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "mutated in colorectal cancers"
            },
            "metanode": "Gene"
        },
        {
            "id": 16723,
            "identifier": "7169",
            "identifier_type": "int",
            "name": "TPM2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7169",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "tropomyosin 2 (beta)"
            },
            "metanode": "Gene"
        },
        {
            "id": 16724,
            "identifier": "GO:0034375",
            "identifier_type": "str",
            "name": "high-density lipoprotein particle remodeling",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034375",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 16725,
            "identifier": "399832",
            "identifier_type": "int",
            "name": "DKFZp686M1136",
            "properties": {
                "url": "http://identifiers.org/ncbigene/399832",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "uncharacterized LOC399832"
            },
            "metanode": "Gene"
        },
        {
            "id": 16726,
            "identifier": "56654",
            "identifier_type": "int",
            "name": "NPDC1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56654",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "neural proliferation, differentiation and control, 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 16727,
            "identifier": "C0007787",
            "identifier_type": "str",
            "name": "Transient ischaemic attack",
            "properties": {
                "url": "http://identifiers.org/umls/C0007787",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 16728,
            "identifier": "GO:0002949",
            "identifier_type": "str",
            "name": "tRNA threonylcarbamoyladenosine modification",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002949",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 16729,
            "identifier": "D001049",
            "identifier_type": "str",
            "name": "Apnea",
            "properties": {
                "url": "http://identifiers.org/mesh/D001049",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 16730,
            "identifier": "C0232488",
            "identifier_type": "str",
            "name": "Abdominal colic",
            "properties": {
                "url": "http://identifiers.org/umls/C0232488",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 16731,
            "identifier": "GO:0008504",
            "identifier_type": "str",
            "name": "monoamine transmembrane transporter activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008504",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 16732,
            "identifier": "C0857083",
            "identifier_type": "str",
            "name": "Generalized macular rash",
            "properties": {
                "url": "http://identifiers.org/umls/C0857083",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 16733,
            "identifier": "147906",
            "identifier_type": "int",
            "name": "DACT3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/147906",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "dishevelled-binding antagonist of beta-catenin 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 16734,
            "identifier": "1192",
            "identifier_type": "int",
            "name": "CLIC1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1192",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "chloride intracellular channel 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 16735,
            "identifier": "9955",
            "identifier_type": "int",
            "name": "HS3ST3A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9955",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1"
            },
            "metanode": "Gene"
        },
        {
            "id": 16736,
            "identifier": "C1504383",
            "identifier_type": "str",
            "name": "Radiation skin injury",
            "properties": {
                "url": "http://identifiers.org/umls/C1504383",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 16737,
            "identifier": "105379398",
            "identifier_type": "int",
            "name": "LOC105379398",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105379398",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "uncharacterized LOC105379398"
            },
            "metanode": "Gene"
        },
        {
            "id": 16738,
            "identifier": "GO:0060997",
            "identifier_type": "str",
            "name": "dendritic spine morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060997",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 16739,
            "identifier": "158866",
            "identifier_type": "int",
            "name": "ZDHHC15",
            "properties": {
                "url": "http://identifiers.org/ncbigene/158866",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "zinc finger, DHHC-type containing 15"
            },
            "metanode": "Gene"
        },
        {
            "id": 16740,
            "identifier": "101060301",
            "identifier_type": "int",
            "name": "HNRNPCL4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/101060301",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "heterogeneous nuclear ribonucleoprotein C-like 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 16741,
            "identifier": "8312",
            "identifier_type": "int",
            "name": "AXIN1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8312",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "axin 1"
            },
            "metanode": "Gene"
        }
    ]
}