Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=17000

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17025",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=16975",
    "results": [
        {
            "id": 16989,
            "identifier": "GO:0051733",
            "identifier_type": "str",
            "name": "polydeoxyribonucleotide kinase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051733",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 16990,
            "identifier": "347475",
            "identifier_type": "int",
            "name": "CCDC160",
            "properties": {
                "url": "http://identifiers.org/ncbigene/347475",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "coiled-coil domain containing 160"
            },
            "metanode": "Gene"
        },
        {
            "id": 16991,
            "identifier": "C0000729",
            "identifier_type": "str",
            "name": "Abdominal cramps",
            "properties": {
                "url": "http://identifiers.org/umls/C0000729",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 16992,
            "identifier": "284992",
            "identifier_type": "int",
            "name": "CCDC150",
            "properties": {
                "url": "http://identifiers.org/ncbigene/284992",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "coiled-coil domain containing 150"
            },
            "metanode": "Gene"
        },
        {
            "id": 16993,
            "identifier": "7222",
            "identifier_type": "int",
            "name": "TRPC3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7222",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "transient receptor potential cation channel, subfamily C, member 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 16994,
            "identifier": "GO:0015254",
            "identifier_type": "str",
            "name": "glycerol channel activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0015254",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 16995,
            "identifier": "GO:0044319",
            "identifier_type": "str",
            "name": "wound healing, spreading of cells",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0044319",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 16996,
            "identifier": "GO:0061098",
            "identifier_type": "str",
            "name": "positive regulation of protein tyrosine kinase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0061098",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 16997,
            "identifier": "55601",
            "identifier_type": "int",
            "name": "DDX60",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55601",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "DEAD (Asp-Glu-Ala-Asp) box polypeptide 60"
            },
            "metanode": "Gene"
        },
        {
            "id": 16998,
            "identifier": "DB00598",
            "identifier_type": "str",
            "name": "Labetalol",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00598",
                "inchi": "InChI=1S/C19H24N2O3/c1-13(7-8-14-5-3-2-4-6-14)21-12-18(23)15-9-10-17(22)16(11-15)19(20)24/h2-6,9-11,13,18,21-23H,7-8,12H2,1H3,(H2,20,24)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=SGUAFYQXFOLMHL-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 16999,
            "identifier": "256148",
            "identifier_type": "int",
            "name": "OR4S1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/256148",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "olfactory receptor, family 4, subfamily S, member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17000,
            "identifier": "GO:0090571",
            "identifier_type": "str",
            "name": "RNA polymerase II transcription repressor complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090571",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 17001,
            "identifier": "C0855642",
            "identifier_type": "str",
            "name": "Blood uric acid abnormal",
            "properties": {
                "url": "http://identifiers.org/umls/C0855642",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17002,
            "identifier": "283",
            "identifier_type": "int",
            "name": "ANG",
            "properties": {
                "url": "http://identifiers.org/ncbigene/283",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "angiogenin, ribonuclease, RNase A family, 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 17003,
            "identifier": "9046",
            "identifier_type": "int",
            "name": "DOK2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9046",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "docking protein 2, 56kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 17004,
            "identifier": "DB01422",
            "identifier_type": "str",
            "name": "Nitroxoline",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01422",
                "inchi": "InChI=1S/C9H6N2O3/c12-8-4-3-7(11(13)14)6-2-1-5-10-9(6)8/h1-5,12H",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=RJIWZDNTCBHXAL-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 17005,
            "identifier": "C0038454",
            "identifier_type": "str",
            "name": "Cerebrovascular accident",
            "properties": {
                "url": "http://identifiers.org/umls/C0038454",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17006,
            "identifier": "387775",
            "identifier_type": "int",
            "name": "SLC22A10",
            "properties": {
                "url": "http://identifiers.org/ncbigene/387775",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "solute carrier family 22, member 10"
            },
            "metanode": "Gene"
        },
        {
            "id": 17007,
            "identifier": "284618",
            "identifier_type": "int",
            "name": "RUSC1-AS1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/284618",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "RUSC1 antisense RNA 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17008,
            "identifier": "340120",
            "identifier_type": "int",
            "name": "ANKRD34B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/340120",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "ankyrin repeat domain 34B"
            },
            "metanode": "Gene"
        },
        {
            "id": 17009,
            "identifier": "2736",
            "identifier_type": "int",
            "name": "GLI2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2736",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "GLI family zinc finger 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 17010,
            "identifier": "282991",
            "identifier_type": "int",
            "name": "BLOC1S2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/282991",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "biogenesis of lysosomal organelles complex-1, subunit 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 17011,
            "identifier": "5333",
            "identifier_type": "int",
            "name": "PLCD1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5333",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "phospholipase C, delta 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17012,
            "identifier": "PC7_4085",
            "identifier_type": "str",
            "name": "GTP hydrolysis and joining of the 60S ribosomal subunit",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 17013,
            "identifier": "55227",
            "identifier_type": "int",
            "name": "LRRC1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55227",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "leucine rich repeat containing 1"
            },
            "metanode": "Gene"
        }
    ]
}