Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=17200

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17225",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17175",
    "results": [
        {
            "id": 17190,
            "identifier": "165257",
            "identifier_type": "int",
            "name": "C1QL2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/165257",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "complement component 1, q subcomponent-like 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 17191,
            "identifier": "GO:0048388",
            "identifier_type": "str",
            "name": "endosomal lumen acidification",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048388",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17192,
            "identifier": "105373200",
            "identifier_type": "int",
            "name": "LOC105373200",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105373200",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "G antigen 2D-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 17193,
            "identifier": "152940",
            "identifier_type": "int",
            "name": "C4orf45",
            "properties": {
                "url": "http://identifiers.org/ncbigene/152940",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "chromosome 4 open reading frame 45"
            },
            "metanode": "Gene"
        },
        {
            "id": 17194,
            "identifier": "2258",
            "identifier_type": "int",
            "name": "FGF13",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2258",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "fibroblast growth factor 13"
            },
            "metanode": "Gene"
        },
        {
            "id": 17195,
            "identifier": "10765",
            "identifier_type": "int",
            "name": "KDM5B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10765",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "lysine (K)-specific demethylase 5B"
            },
            "metanode": "Gene"
        },
        {
            "id": 17196,
            "identifier": "GO:0002712",
            "identifier_type": "str",
            "name": "regulation of B cell mediated immunity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002712",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17197,
            "identifier": "C0856069",
            "identifier_type": "str",
            "name": "Vasculitis gastrointestinal",
            "properties": {
                "url": "http://identifiers.org/umls/C0856069",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17198,
            "identifier": "DB00188",
            "identifier_type": "str",
            "name": "Bortezomib",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00188",
                "inchi": "InChI=1S/C19H25BN4O4/c1-13(2)10-17(20(27)28)24-18(25)15(11-14-6-4-3-5-7-14)23-19(26)16-12-21-8-9-22-16/h3-9,12-13,15,17,27-28H,10-11H2,1-2H3,(H,23,26)(H,24,25)/t15-,17-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=GXJABQQUPOEUTA-RDJZCZTQSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 17199,
            "identifier": "DOID:3571",
            "identifier_type": "str",
            "name": "liver cancer",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/DOID_3571",
                "source": "Disease Ontology",
                "license": "CC BY 3.0"
            },
            "metanode": "Disease"
        },
        {
            "id": 17200,
            "identifier": "GO:0051596",
            "identifier_type": "str",
            "name": "methylglyoxal catabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051596",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17201,
            "identifier": "127064",
            "identifier_type": "int",
            "name": "OR2T12",
            "properties": {
                "url": "http://identifiers.org/ncbigene/127064",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "olfactory receptor, family 2, subfamily T, member 12"
            },
            "metanode": "Gene"
        },
        {
            "id": 17202,
            "identifier": "54749",
            "identifier_type": "int",
            "name": "EPDR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54749",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "ependymin related 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17203,
            "identifier": "GO:0072049",
            "identifier_type": "str",
            "name": "comma-shaped body morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072049",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17204,
            "identifier": "GO:2000766",
            "identifier_type": "str",
            "name": "negative regulation of cytoplasmic translation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000766",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17205,
            "identifier": "GO:0071437",
            "identifier_type": "str",
            "name": "invadopodium",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071437",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 17206,
            "identifier": "GO:0021816",
            "identifier_type": "str",
            "name": "extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021816",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17207,
            "identifier": "GO:0061589",
            "identifier_type": "str",
            "name": "calcium activated phosphatidylserine scrambling",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0061589",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17208,
            "identifier": "100287478",
            "identifier_type": "int",
            "name": "USP17L21",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100287478",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "ubiquitin specific peptidase 17-like family member 21"
            },
            "metanode": "Gene"
        },
        {
            "id": 17209,
            "identifier": "GO:0097490",
            "identifier_type": "str",
            "name": "sympathetic neuron projection extension",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0097490",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17210,
            "identifier": "6854",
            "identifier_type": "int",
            "name": "SYN2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6854",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "synapsin II"
            },
            "metanode": "Gene"
        },
        {
            "id": 17211,
            "identifier": "DB00961",
            "identifier_type": "str",
            "name": "Mepivacaine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00961",
                "inchi": "InChI=1S/C15H22N2O/c1-11-7-6-8-12(2)14(11)16-15(18)13-9-4-5-10-17(13)3/h6-8,13H,4-5,9-10H2,1-3H3,(H,16,18)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=INWLQCZOYSRPNW-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 17212,
            "identifier": "241",
            "identifier_type": "int",
            "name": "ALOX5AP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/241",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "arachidonate 5-lipoxygenase-activating protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 17213,
            "identifier": "8748",
            "identifier_type": "int",
            "name": "ADAM20",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8748",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "ADAM metallopeptidase domain 20"
            },
            "metanode": "Gene"
        },
        {
            "id": 17214,
            "identifier": "DB00818",
            "identifier_type": "str",
            "name": "Propofol",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00818",
                "inchi": "InChI=1S/C12H18O/c1-8(2)10-6-5-7-11(9(3)4)12(10)13/h5-9,13H,1-4H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=OLBCVFGFOZPWHH-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        }
    ]
}