Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=17400

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17425",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17375",
    "results": [
        {
            "id": 17391,
            "identifier": "C0020503",
            "identifier_type": "str",
            "name": "Hyperparathyroidism secondary",
            "properties": {
                "url": "http://identifiers.org/umls/C0020503",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17392,
            "identifier": "GO:0002710",
            "identifier_type": "str",
            "name": "negative regulation of T cell mediated immunity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002710",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17393,
            "identifier": "22874",
            "identifier_type": "int",
            "name": "PLEKHA6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/22874",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "pleckstrin homology domain containing, family A member 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 17394,
            "identifier": "198437",
            "identifier_type": "int",
            "name": "LKAAEAR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/198437",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "LKAAEAR motif containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17395,
            "identifier": "GO:0000813",
            "identifier_type": "str",
            "name": "ESCRT I complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000813",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 17396,
            "identifier": "GO:0060564",
            "identifier_type": "str",
            "name": "negative regulation of APC-Cdc20 complex activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060564",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17397,
            "identifier": "84879",
            "identifier_type": "int",
            "name": "MFSD2A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84879",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "major facilitator superfamily domain containing 2A"
            },
            "metanode": "Gene"
        },
        {
            "id": 17398,
            "identifier": "GO:0042407",
            "identifier_type": "str",
            "name": "cristae formation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0042407",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17399,
            "identifier": "C0262431",
            "identifier_type": "str",
            "name": "Spinal compression fracture",
            "properties": {
                "url": "http://identifiers.org/umls/C0262431",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17400,
            "identifier": "7010",
            "identifier_type": "int",
            "name": "TEK",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7010",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "TEK tyrosine kinase, endothelial"
            },
            "metanode": "Gene"
        },
        {
            "id": 17401,
            "identifier": "GO:1903531",
            "identifier_type": "str",
            "name": "negative regulation of secretion by cell",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1903531",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17402,
            "identifier": "388523",
            "identifier_type": "int",
            "name": "ZNF728",
            "properties": {
                "url": "http://identifiers.org/ncbigene/388523",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 728"
            },
            "metanode": "Gene"
        },
        {
            "id": 17403,
            "identifier": "1586",
            "identifier_type": "int",
            "name": "CYP17A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1586",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "cytochrome P450, family 17, subfamily A, polypeptide 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17404,
            "identifier": "GO:0005618",
            "identifier_type": "str",
            "name": "cell wall",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005618",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 17405,
            "identifier": "GO:0036461",
            "identifier_type": "str",
            "name": "BLOC-2 complex binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0036461",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 17406,
            "identifier": "GO:0045416",
            "identifier_type": "str",
            "name": "positive regulation of interleukin-8 biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045416",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17407,
            "identifier": "GO:0046822",
            "identifier_type": "str",
            "name": "regulation of nucleocytoplasmic transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0046822",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17408,
            "identifier": "GO:0060339",
            "identifier_type": "str",
            "name": "negative regulation of type I interferon-mediated signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060339",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17409,
            "identifier": "153218",
            "identifier_type": "int",
            "name": "SPINK13",
            "properties": {
                "url": "http://identifiers.org/ncbigene/153218",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "serine peptidase inhibitor, Kazal type 13 (putative)"
            },
            "metanode": "Gene"
        },
        {
            "id": 17410,
            "identifier": "87",
            "identifier_type": "int",
            "name": "ACTN1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/87",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "actinin, alpha 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17411,
            "identifier": "8578",
            "identifier_type": "int",
            "name": "SCARF1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8578",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "scavenger receptor class F, member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17412,
            "identifier": "GO:0072361",
            "identifier_type": "str",
            "name": "regulation of glycolytic process by regulation of transcription from RNA polymerase II promoter",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072361",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17413,
            "identifier": "DB00615",
            "identifier_type": "str",
            "name": "Rifabutin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00615",
                "inchi": "InChI=1S/C46H62N4O11/c1-22(2)21-50-18-16-46(17-19-50)48-34-31-32-39(54)28(8)42-33(31)43(56)45(10,61-42)59-20-15-30(58-11)25(5)41(60-29(9)51)27(7)38(53)26(6)37(52)23(3)13-12-14-24(4)44(57)47-36(40(32)55)35(34)49-46/h12-15,20,22-23,25-27,30,37-38,41,49,52-54H,16-19,21H2,1-11H3,(H,47,57)/b13-12+,20-15+,24-14-/t23-,25+,26+,27+,30-,37-,38+,41+,45-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=ATEBXHFBFRCZMA-VXTBVIBXSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 17414,
            "identifier": "DB01338",
            "identifier_type": "str",
            "name": "Pipecuronium",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01338",
                "inchi": "InChI=1S/C35H62N4O4/c1-24(40)42-32-21-26-9-10-27-28(35(26,4)23-31(32)37-15-19-39(7,8)20-16-37)11-12-34(3)29(27)22-30(33(34)43-25(2)41)36-13-17-38(5,6)18-14-36/h26-33H,9-23H2,1-8H3/q+2/t26-,27+,28-,29-,30-,31-,32-,33-,34-,35-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=OWWLUIWOFHMHOQ-XGHATYIMSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 17415,
            "identifier": "253738",
            "identifier_type": "int",
            "name": "EBF3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/253738",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "early B-cell factor 3"
            },
            "metanode": "Gene"
        }
    ]
}