Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=17450

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17475",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17425",
    "results": [
        {
            "id": 17440,
            "identifier": "728568",
            "identifier_type": "int",
            "name": "C12orf73",
            "properties": {
                "url": "http://identifiers.org/ncbigene/728568",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "chromosome 12 open reading frame 73"
            },
            "metanode": "Gene"
        },
        {
            "id": 17441,
            "identifier": "27125",
            "identifier_type": "int",
            "name": "AFF4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/27125",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "AF4/FMR2 family, member 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 17442,
            "identifier": "2848",
            "identifier_type": "int",
            "name": "GPR25",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2848",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "G protein-coupled receptor 25"
            },
            "metanode": "Gene"
        },
        {
            "id": 17443,
            "identifier": "142683",
            "identifier_type": "int",
            "name": "ITLN2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/142683",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "intelectin 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 17444,
            "identifier": "57537",
            "identifier_type": "int",
            "name": "SORCS2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57537",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "sortilin-related VPS10 domain containing receptor 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 17445,
            "identifier": "C1262010",
            "identifier_type": "str",
            "name": "Post lumbar puncture syndrome",
            "properties": {
                "url": "http://identifiers.org/umls/C1262010",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17446,
            "identifier": "C0232200",
            "identifier_type": "str",
            "name": "Gallop rhythm",
            "properties": {
                "url": "http://identifiers.org/umls/C0232200",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17447,
            "identifier": "5445",
            "identifier_type": "int",
            "name": "PON2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5445",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "paraoxonase 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 17448,
            "identifier": "DB00035",
            "identifier_type": "str",
            "name": "Desmopressin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00035",
                "inchi": "InChI=1S/C46H64N14O12S2/c47-35(62)15-14-29-40(67)58-32(22-36(48)63)43(70)59-33(45(72)60-18-5-9-34(60)44(71)56-28(8-4-17-52-46(50)51)39(66)53-23-37(49)64)24-74-73-19-16-38(65)54-30(21-26-10-12-27(61)13-11-26)41(68)57-31(42(69)55-29)20-25-6-2-1-3-7-25/h1-3,6-7,10-13,28-34,61H,4-5,8-9,14-24H2,(H2,47,62)(H2,48,63)(H2,49,64)(H,53,66)(H,54,65)(H,55,69)(H,56,71)(H,57,68)(H,58,67)(H,59,70)(H4,50,51,52)/t28-,29-,30-,31-,32-,33-,34-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=NFLWUMRGJYTJIN-NXBWRCJVSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 17449,
            "identifier": "23412",
            "identifier_type": "int",
            "name": "COMMD3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23412",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "COMM domain containing 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 17450,
            "identifier": "169270",
            "identifier_type": "int",
            "name": "ZNF596",
            "properties": {
                "url": "http://identifiers.org/ncbigene/169270",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "zinc finger protein 596"
            },
            "metanode": "Gene"
        },
        {
            "id": 17451,
            "identifier": "84124",
            "identifier_type": "int",
            "name": "ZNF394",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84124",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "zinc finger protein 394"
            },
            "metanode": "Gene"
        },
        {
            "id": 17452,
            "identifier": "C0234916",
            "identifier_type": "str",
            "name": "Rash follicular",
            "properties": {
                "url": "http://identifiers.org/umls/C0234916",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17453,
            "identifier": "100131107",
            "identifier_type": "int",
            "name": "LOC100131107",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100131107",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "putative UPF0607 protein ENSP00000383783"
            },
            "metanode": "Gene"
        },
        {
            "id": 17454,
            "identifier": "GO:0032543",
            "identifier_type": "str",
            "name": "mitochondrial translation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032543",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17455,
            "identifier": "GO:0060796",
            "identifier_type": "str",
            "name": "regulation of transcription involved in primary germ layer cell fate commitment",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060796",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17456,
            "identifier": "64784",
            "identifier_type": "int",
            "name": "CRTC3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/64784",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "CREB regulated transcription coactivator 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 17457,
            "identifier": "C0154946",
            "identifier_type": "str",
            "name": "Acute angle-closure glaucoma",
            "properties": {
                "url": "http://identifiers.org/umls/C0154946",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17458,
            "identifier": "GO:0006436",
            "identifier_type": "str",
            "name": "tryptophanyl-tRNA aminoacylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006436",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17459,
            "identifier": "GO:1904714",
            "identifier_type": "str",
            "name": "regulation of chaperone-mediated autophagy",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904714",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17460,
            "identifier": "309",
            "identifier_type": "int",
            "name": "ANXA6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/309",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "annexin A6"
            },
            "metanode": "Gene"
        },
        {
            "id": 17461,
            "identifier": "975",
            "identifier_type": "int",
            "name": "CD81",
            "properties": {
                "url": "http://identifiers.org/ncbigene/975",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "CD81 molecule"
            },
            "metanode": "Gene"
        },
        {
            "id": 17462,
            "identifier": "GO:0055080",
            "identifier_type": "str",
            "name": "cation homeostasis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0055080",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17463,
            "identifier": "GO:0090004",
            "identifier_type": "str",
            "name": "positive regulation of establishment of protein localization to plasma membrane",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090004",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17464,
            "identifier": "259293",
            "identifier_type": "int",
            "name": "TAS2R30",
            "properties": {
                "url": "http://identifiers.org/ncbigene/259293",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "taste receptor, type 2, member 30"
            },
            "metanode": "Gene"
        }
    ]
}