Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=17500
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17525", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17475", "results": [ { "id": 17490, "identifier": "GO:0032496", "identifier_type": "str", "name": "response to lipopolysaccharide", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032496", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 17491, "identifier": "102725024", "identifier_type": "int", "name": "LOC102725024", "properties": { "url": "http://identifiers.org/ncbigene/102725024", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "mucin-6-like" }, "metanode": "Gene" }, { "id": 17492, "identifier": "DOID:10534", "identifier_type": "str", "name": "stomach cancer", "properties": { "url": "http://purl.obolibrary.org/obo/DOID_10534", "source": "Disease Ontology", "license": "CC BY 3.0" }, "metanode": "Disease" }, { "id": 17493, "identifier": "126204", "identifier_type": "int", "name": "NLRP13", "properties": { "url": "http://identifiers.org/ncbigene/126204", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "NLR family, pyrin domain containing 13" }, "metanode": "Gene" }, { "id": 17494, "identifier": "9918", "identifier_type": "int", "name": "NCAPD2", "properties": { "url": "http://identifiers.org/ncbigene/9918", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "non-SMC condensin I complex, subunit D2" }, "metanode": "Gene" }, { "id": 17495, "identifier": "GO:1903209", "identifier_type": "str", "name": "positive regulation of oxidative stress-induced cell death", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903209", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 17496, "identifier": "3736", "identifier_type": "int", "name": "KCNA1", "properties": { "url": "http://identifiers.org/ncbigene/3736", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "potassium channel, voltage gated shaker related subfamily A, member 1" }, "metanode": "Gene" }, { "id": 17497, "identifier": "8403", "identifier_type": "int", "name": "SOX14", "properties": { "url": "http://identifiers.org/ncbigene/8403", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "SRY (sex determining region Y)-box 14" }, "metanode": "Gene" }, { "id": 17498, "identifier": "GO:1903921", "identifier_type": "str", "name": "regulation of protein processing in phagocytic vesicle", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903921", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 17499, "identifier": "GO:0036015", "identifier_type": "str", "name": "response to interleukin-3", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0036015", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 17500, "identifier": "203413", "identifier_type": "int", "name": "CT83", "properties": { "url": "http://identifiers.org/ncbigene/203413", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "cancer/testis antigen 83" }, "metanode": "Gene" }, { "id": 17501, "identifier": "283991", "identifier_type": "int", "name": "UBALD2", "properties": { "url": "http://identifiers.org/ncbigene/283991", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "UBA-like domain containing 2" }, "metanode": "Gene" }, { "id": 17502, "identifier": "2109", "identifier_type": "int", "name": "ETFB", "properties": { "url": "http://identifiers.org/ncbigene/2109", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "electron-transfer-flavoprotein, beta polypeptide" }, "metanode": "Gene" }, { "id": 17503, "identifier": "10856", "identifier_type": "int", "name": "RUVBL2", "properties": { "url": "http://identifiers.org/ncbigene/10856", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "RuvB-like AAA ATPase 2" }, "metanode": "Gene" }, { "id": 17504, "identifier": "445347", "identifier_type": "int", "name": "TARP", "properties": { "url": "http://identifiers.org/ncbigene/445347", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "TCR gamma alternate reading frame protein" }, "metanode": "Gene" }, { "id": 17505, "identifier": "26269", "identifier_type": "int", "name": "FBXO8", "properties": { "url": "http://identifiers.org/ncbigene/26269", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "F-box protein 8" }, "metanode": "Gene" }, { "id": 17506, "identifier": "353322", "identifier_type": "int", "name": "ANKRD37", "properties": { "url": "http://identifiers.org/ncbigene/353322", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "ankyrin repeat domain 37" }, "metanode": "Gene" }, { "id": 17507, "identifier": "GO:0042788", "identifier_type": "str", "name": "polysomal ribosome", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042788", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 17508, "identifier": "GO:0015798", "identifier_type": "str", "name": "myo-inositol transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0015798", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 17509, "identifier": "100506374", "identifier_type": "int", "name": "LOC100506374", "properties": { "url": "http://identifiers.org/ncbigene/100506374", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "uncharacterized LOC100506374" }, "metanode": "Gene" }, { "id": 17510, "identifier": "4690", "identifier_type": "int", "name": "NCK1", "properties": { "url": "http://identifiers.org/ncbigene/4690", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "NCK adaptor protein 1" }, "metanode": "Gene" }, { "id": 17511, "identifier": "54584", "identifier_type": "int", "name": "GNB1L", "properties": { "url": "http://identifiers.org/ncbigene/54584", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "guanine nucleotide binding protein (G protein), beta polypeptide 1-like" }, "metanode": "Gene" }, { "id": 17512, "identifier": "GO:0009566", "identifier_type": "str", "name": "fertilization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0009566", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 17513, "identifier": "C0853026", "identifier_type": "str", "name": "Porphyria non-acute", "properties": { "url": "http://identifiers.org/umls/C0853026", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 17514, "identifier": "85012", "identifier_type": "int", "name": "TCEAL3", "properties": { "url": "http://identifiers.org/ncbigene/85012", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "transcription elongation factor A (SII)-like 3" }, "metanode": "Gene" } ] }