Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=17875

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17900",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17850",
    "results": [
        {
            "id": 17864,
            "identifier": "635",
            "identifier_type": "int",
            "name": "BHMT",
            "properties": {
                "url": "http://identifiers.org/ncbigene/635",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "betaine--homocysteine S-methyltransferase"
            },
            "metanode": "Gene"
        },
        {
            "id": 17865,
            "identifier": "9142",
            "identifier_type": "int",
            "name": "TMEM257",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9142",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "transmembrane protein 257"
            },
            "metanode": "Gene"
        },
        {
            "id": 17901,
            "identifier": "GO:0017089",
            "identifier_type": "str",
            "name": "glycolipid transporter activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0017089",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 17902,
            "identifier": "C0030299",
            "identifier_type": "str",
            "name": "Pancreatic pseudocyst",
            "properties": {
                "url": "http://identifiers.org/umls/C0030299",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17866,
            "identifier": "DB00200",
            "identifier_type": "str",
            "name": "Hydroxocobalamin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00200",
                "inchi": "InChI=1S/C62H90N13O14P.Co.H2O/c1-29-20-39-40(21-30(29)2)75(28-70-39)57-52(84)53(41(27-76)87-57)89-90(85,86)88-31(3)26-69-49(83)18-19-59(8)37(22-46(66)80)56-62(11)61(10,25-48(68)82)36(14-17-45(65)79)51(74-62)33(5)55-60(9,24-47(67)81)34(12-15-43(63)77)38(71-55)23-42-58(6,7)35(13-16-44(64)78)50(72-42)32(4)54(59)73-56;;/h20-21,23,28,31,34-37,41,52-53,56-57,76,84H,12-19,22,24-27H2,1-11H3,(H15,63,64,65,66,67,68,69,71,72,73,74,77,78,79,80,81,82,83,85,86);;1H2/q;+3;/p-3/t31-,34-,35-,36-,37+,41-,52-,53-,56-,57+,59-,60+,61+,62+;;/m1../s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=YOZNUFWCRFCGIH-WZHZPDAFSA-K"
            },
            "metanode": "Compound"
        },
        {
            "id": 17867,
            "identifier": "GO:0072174",
            "identifier_type": "str",
            "name": "metanephric tubule formation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072174",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17868,
            "identifier": "GO:0007519",
            "identifier_type": "str",
            "name": "skeletal muscle tissue development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007519",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17869,
            "identifier": "27237",
            "identifier_type": "int",
            "name": "ARHGEF16",
            "properties": {
                "url": "http://identifiers.org/ncbigene/27237",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "Rho guanine nucleotide exchange factor (GEF) 16"
            },
            "metanode": "Gene"
        },
        {
            "id": 17870,
            "identifier": "2960",
            "identifier_type": "int",
            "name": "GTF2E1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2960",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "general transcription factor IIE, polypeptide 1, alpha 56kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 17871,
            "identifier": "57521",
            "identifier_type": "int",
            "name": "RPTOR",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57521",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "regulatory associated protein of MTOR, complex 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17872,
            "identifier": "83538",
            "identifier_type": "int",
            "name": "TTC25",
            "properties": {
                "url": "http://identifiers.org/ncbigene/83538",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "tetratricopeptide repeat domain 25"
            },
            "metanode": "Gene"
        },
        {
            "id": 17873,
            "identifier": "223117",
            "identifier_type": "int",
            "name": "SEMA3D",
            "properties": {
                "url": "http://identifiers.org/ncbigene/223117",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D"
            },
            "metanode": "Gene"
        },
        {
            "id": 17874,
            "identifier": "80184",
            "identifier_type": "int",
            "name": "CEP290",
            "properties": {
                "url": "http://identifiers.org/ncbigene/80184",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "centrosomal protein 290kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 17875,
            "identifier": "160762",
            "identifier_type": "int",
            "name": "CCDC63",
            "properties": {
                "url": "http://identifiers.org/ncbigene/160762",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "coiled-coil domain containing 63"
            },
            "metanode": "Gene"
        },
        {
            "id": 17876,
            "identifier": "5429",
            "identifier_type": "int",
            "name": "POLH",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5429",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "polymerase (DNA directed), eta"
            },
            "metanode": "Gene"
        },
        {
            "id": 17877,
            "identifier": "D055955",
            "identifier_type": "str",
            "name": "Susac Syndrome",
            "properties": {
                "url": "http://identifiers.org/mesh/D055955",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 17878,
            "identifier": "C3160759",
            "identifier_type": "str",
            "name": "Tumour cell mobilisation",
            "properties": {
                "url": "http://identifiers.org/umls/C3160759",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17879,
            "identifier": "C0235942",
            "identifier_type": "str",
            "name": "Skull malformation",
            "properties": {
                "url": "http://identifiers.org/umls/C0235942",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17880,
            "identifier": "23524",
            "identifier_type": "int",
            "name": "SRRM2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23524",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "serine/arginine repetitive matrix 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 17881,
            "identifier": "GO:0045818",
            "identifier_type": "str",
            "name": "negative regulation of glycogen catabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045818",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17882,
            "identifier": "GO:0002784",
            "identifier_type": "str",
            "name": "regulation of antimicrobial peptide production",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002784",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17883,
            "identifier": "84236",
            "identifier_type": "int",
            "name": "RHBDD1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84236",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "rhomboid domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17884,
            "identifier": "92999",
            "identifier_type": "int",
            "name": "ZBTB47",
            "properties": {
                "url": "http://identifiers.org/ncbigene/92999",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "zinc finger and BTB domain containing 47"
            },
            "metanode": "Gene"
        },
        {
            "id": 17885,
            "identifier": "339501",
            "identifier_type": "int",
            "name": "PRSS38",
            "properties": {
                "url": "http://identifiers.org/ncbigene/339501",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "protease, serine, 38"
            },
            "metanode": "Gene"
        },
        {
            "id": 17886,
            "identifier": "123283",
            "identifier_type": "int",
            "name": "TARSL2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/123283",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "threonyl-tRNA synthetase-like 2"
            },
            "metanode": "Gene"
        }
    ]
}