Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=17900

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17925",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=17875",
    "results": [
        {
            "id": 17887,
            "identifier": "GO:0021775",
            "identifier_type": "str",
            "name": "smoothened signaling pathway involved in ventral spinal cord interneuron specification",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021775",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17888,
            "identifier": "C0242528",
            "identifier_type": "str",
            "name": "Azotaemia",
            "properties": {
                "url": "http://identifiers.org/umls/C0242528",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17889,
            "identifier": "6383",
            "identifier_type": "int",
            "name": "SDC2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6383",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "syndecan 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 17890,
            "identifier": "145946",
            "identifier_type": "int",
            "name": "SPATA8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/145946",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "spermatogenesis associated 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 17891,
            "identifier": "GO:1901861",
            "identifier_type": "str",
            "name": "regulation of muscle tissue development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901861",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17892,
            "identifier": "102724828",
            "identifier_type": "int",
            "name": "LOC102724828",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102724828",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "39S ribosomal protein L23, mitochondrial-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 17893,
            "identifier": "100996631",
            "identifier_type": "int",
            "name": "TCP11X1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100996631",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "t-complex 11 family, X-linked 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17894,
            "identifier": "117245",
            "identifier_type": "int",
            "name": "HRASLS5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/117245",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "HRAS-like suppressor family, member 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 17895,
            "identifier": "147657",
            "identifier_type": "int",
            "name": "ZNF480",
            "properties": {
                "url": "http://identifiers.org/ncbigene/147657",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 480"
            },
            "metanode": "Gene"
        },
        {
            "id": 17896,
            "identifier": "100533183",
            "identifier_type": "int",
            "name": "ZNF664-FAM101A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100533183",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "filamin-interacting protein FAM101A"
            },
            "metanode": "Gene"
        },
        {
            "id": 17897,
            "identifier": "9706",
            "identifier_type": "int",
            "name": "ULK2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9706",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "unc-51 like autophagy activating kinase 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 17898,
            "identifier": "GO:0006452",
            "identifier_type": "str",
            "name": "translational frameshifting",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006452",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17903,
            "identifier": "GO:0048266",
            "identifier_type": "str",
            "name": "behavioral response to pain",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048266",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17904,
            "identifier": "10112",
            "identifier_type": "int",
            "name": "KIF20A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10112",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "kinesin family member 20A"
            },
            "metanode": "Gene"
        },
        {
            "id": 17905,
            "identifier": "83862",
            "identifier_type": "int",
            "name": "TMEM120A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/83862",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "transmembrane protein 120A"
            },
            "metanode": "Gene"
        },
        {
            "id": 17906,
            "identifier": "80764",
            "identifier_type": "int",
            "name": "THAP7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/80764",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "THAP domain containing 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 17907,
            "identifier": "105372855",
            "identifier_type": "int",
            "name": "LOC105372855",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105372855",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "putative POM121-like protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17908,
            "identifier": "GO:0050798",
            "identifier_type": "str",
            "name": "activated T cell proliferation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0050798",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 17909,
            "identifier": "30014",
            "identifier_type": "int",
            "name": "SPANXA1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/30014",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "sperm protein associated with the nucleus, X-linked, family member A1"
            },
            "metanode": "Gene"
        },
        {
            "id": 17910,
            "identifier": "5993",
            "identifier_type": "int",
            "name": "RFX5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5993",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "regulatory factor X, 5 (influences HLA class II expression)"
            },
            "metanode": "Gene"
        },
        {
            "id": 17911,
            "identifier": "10404",
            "identifier_type": "int",
            "name": "CPQ",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10404",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "carboxypeptidase Q"
            },
            "metanode": "Gene"
        },
        {
            "id": 17912,
            "identifier": "D009222",
            "identifier_type": "str",
            "name": "Myotonia",
            "properties": {
                "url": "http://identifiers.org/mesh/D009222",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 17913,
            "identifier": "DB00646",
            "identifier_type": "str",
            "name": "Nystatin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00646",
                "inchi": "InChI=1S/C47H75NO17/c1-27-17-15-13-11-9-7-5-6-8-10-12-14-16-18-35(65-47-45(60)42(48)44(59)30(4)64-47)26-39(56)41(46(61)62)38(55)24-34(52)23-37(54)36(53)20-19-31(49)21-32(50)22-33(51)25-40(57)63-29(3)28(2)43(27)58/h5-6,8,10-18,27-33,35-39,41-45,47,49-51,53-56,58-60H,7,9,19-26,48H2,1-4H3,(H,61,62)/b6-5+,10-8+,13-11+,14-12+,17-15+,18-16+/t27?,28?,29?,30-,31?,32?,33?,35?,36?,37?,38?,39?,41?,42+,43?,44-,45+,47?/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=ZDFDJJJGIRGMBE-AFARJNEBSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 17914,
            "identifier": "C0235567",
            "identifier_type": "str",
            "name": "Sputum increased",
            "properties": {
                "url": "http://identifiers.org/umls/C0235567",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 17915,
            "identifier": "GO:0098903",
            "identifier_type": "str",
            "name": "regulation of membrane repolarization during action potential",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0098903",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}