Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=18025

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=18050",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=18000",
    "results": [
        {
            "id": 18017,
            "identifier": "GO:0072574",
            "identifier_type": "str",
            "name": "hepatocyte proliferation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072574",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18018,
            "identifier": "105379282",
            "identifier_type": "int",
            "name": "LOC105379282",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105379282",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "glucose-dependent insulinotropic receptor-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 18019,
            "identifier": "N0000171131",
            "identifier_type": "str",
            "name": "Allergens",
            "properties": {
                "url": "http://purl.bioontology.org/ontology/NDFRT/N0000171131",
                "source": "FDA via DrugCentral",
                "license": "CC BY 4.0",
                "class_type": "Chemical/Ingredient"
            },
            "metanode": "Pharmacologic Class"
        },
        {
            "id": 18020,
            "identifier": "3673",
            "identifier_type": "int",
            "name": "ITGA2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3673",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)"
            },
            "metanode": "Gene"
        },
        {
            "id": 18021,
            "identifier": "C3241958",
            "identifier_type": "str",
            "name": "Myocardial disorder",
            "properties": {
                "url": "http://identifiers.org/umls/C3241958",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 18022,
            "identifier": "GO:0097164",
            "identifier_type": "str",
            "name": "ammonium ion metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0097164",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18023,
            "identifier": "GO:0021578",
            "identifier_type": "str",
            "name": "hindbrain maturation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021578",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18024,
            "identifier": "PC7_6853",
            "identifier_type": "str",
            "name": "Ras signaling in the CD4+ TCR pathway",
            "properties": {
                "source": "PID via Pathway Commons",
                "license": "CC0 1.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 18025,
            "identifier": "6142",
            "identifier_type": "int",
            "name": "RPL18A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6142",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "ribosomal protein L18a"
            },
            "metanode": "Gene"
        },
        {
            "id": 18026,
            "identifier": "10537",
            "identifier_type": "int",
            "name": "UBD",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10537",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "ubiquitin D"
            },
            "metanode": "Gene"
        },
        {
            "id": 18027,
            "identifier": "GO:0007586",
            "identifier_type": "str",
            "name": "digestion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007586",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18028,
            "identifier": "GO:2000538",
            "identifier_type": "str",
            "name": "positive regulation of B cell chemotaxis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000538",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18029,
            "identifier": "DB00798",
            "identifier_type": "str",
            "name": "Gentamicin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00798",
                "inchi": "InChI=1S/C21H43N5O7/c1-9(25-3)13-6-5-10(22)19(31-13)32-16-11(23)7-12(24)17(14(16)27)33-20-15(28)18(26-4)21(2,29)8-30-20/h9-20,25-29H,5-8,22-24H2,1-4H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=CEAZRRDELHUEMR-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 18030,
            "identifier": "C0010037",
            "identifier_type": "str",
            "name": "Corneal oedema",
            "properties": {
                "url": "http://identifiers.org/umls/C0010037",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 18031,
            "identifier": "DB00177",
            "identifier_type": "str",
            "name": "Valsartan",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00177",
                "inchi": "InChI=1S/C24H29N5O3/c1-4-5-10-21(30)29(22(16(2)3)24(31)32)15-17-11-13-18(14-12-17)19-8-6-7-9-20(19)23-25-27-28-26-23/h6-9,11-14,16,22H,4-5,10,15H2,1-3H3,(H,31,32)(H,25,26,27,28)/t22-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=ACWBQPMHZXGDFX-QFIPXVFZSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 18032,
            "identifier": "GO:2000341",
            "identifier_type": "str",
            "name": "regulation of chemokine (C-X-C motif) ligand 2 production",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000341",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18033,
            "identifier": "DB01233",
            "identifier_type": "str",
            "name": "Metoclopramide",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01233",
                "inchi": "InChI=1S/C14H22ClN3O2/c1-4-18(5-2)7-6-17-14(19)10-8-11(15)12(16)9-13(10)20-3/h8-9H,4-7,16H2,1-3H3,(H,17,19)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=TTWJBBZEZQICBI-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 18034,
            "identifier": "GO:0008079",
            "identifier_type": "str",
            "name": "translation termination factor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008079",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 18035,
            "identifier": "GO:1902669",
            "identifier_type": "str",
            "name": "positive regulation of axon guidance",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902669",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18036,
            "identifier": "647087",
            "identifier_type": "int",
            "name": "C7orf73",
            "properties": {
                "url": "http://identifiers.org/ncbigene/647087",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "chromosome 7 open reading frame 73"
            },
            "metanode": "Gene"
        },
        {
            "id": 18037,
            "identifier": "PC7_4415",
            "identifier_type": "str",
            "name": "HS-GAG degradation",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 18038,
            "identifier": "GO:0001650",
            "identifier_type": "str",
            "name": "fibrillar center",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0001650",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 18039,
            "identifier": "25805",
            "identifier_type": "int",
            "name": "BAMBI",
            "properties": {
                "url": "http://identifiers.org/ncbigene/25805",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "BMP and activin membrane-bound inhibitor"
            },
            "metanode": "Gene"
        },
        {
            "id": 18040,
            "identifier": "1656",
            "identifier_type": "int",
            "name": "DDX6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1656",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "DEAD (Asp-Glu-Ala-Asp) box helicase 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 18041,
            "identifier": "GO:0006283",
            "identifier_type": "str",
            "name": "transcription-coupled nucleotide-excision repair",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006283",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}