Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=18450

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=18475",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=18425",
    "results": [
        {
            "id": 18442,
            "identifier": "C0268731",
            "identifier_type": "str",
            "name": "Glomerulonephropathy",
            "properties": {
                "url": "http://identifiers.org/umls/C0268731",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 18443,
            "identifier": "125997",
            "identifier_type": "int",
            "name": "MBD3L2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/125997",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "methyl-CpG binding domain protein 3-like 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 18444,
            "identifier": "9967",
            "identifier_type": "int",
            "name": "THRAP3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9967",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "thyroid hormone receptor associated protein 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 18445,
            "identifier": "DB00309",
            "identifier_type": "str",
            "name": "Vindesine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00309",
                "inchi": "InChI=1S/C43H55N5O7/c1-6-39(52)21-25-22-42(38(51)55-5,33-27(13-17-47(23-25)24-39)26-11-8-9-12-30(26)45-33)29-19-28-31(20-32(29)54-4)46(3)35-41(28)15-18-48-16-10-14-40(7-2,34(41)48)36(49)43(35,53)37(44)50/h8-12,14,19-20,25,34-36,45,49,52-53H,6-7,13,15-18,21-24H2,1-5H3,(H2,44,50)/t25-,34+,35-,36-,39+,40-,41-,42+,43+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=HHJUWIANJFBDHT-KOTLKJBCSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 18446,
            "identifier": "PC7_6792",
            "identifier_type": "str",
            "name": "RNA Polymerase I Promoter Escape",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 18447,
            "identifier": "C0014306",
            "identifier_type": "str",
            "name": "Enophthalmos",
            "properties": {
                "url": "http://identifiers.org/umls/C0014306",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 18448,
            "identifier": "GO:0090168",
            "identifier_type": "str",
            "name": "Golgi reassembly",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090168",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18449,
            "identifier": "GO:1901895",
            "identifier_type": "str",
            "name": "negative regulation of calcium-transporting ATPase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901895",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18450,
            "identifier": "497661",
            "identifier_type": "int",
            "name": "C18orf32",
            "properties": {
                "url": "http://identifiers.org/ncbigene/497661",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "chromosome 18 open reading frame 32"
            },
            "metanode": "Gene"
        },
        {
            "id": 18451,
            "identifier": "GO:0070096",
            "identifier_type": "str",
            "name": "mitochondrial outer membrane translocase complex assembly",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070096",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18452,
            "identifier": "GO:1990123",
            "identifier_type": "str",
            "name": "L-glutamate import into cell",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1990123",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18453,
            "identifier": "3785",
            "identifier_type": "int",
            "name": "KCNQ2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3785",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "potassium channel, voltage gated KQT-like subfamily Q, member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 18454,
            "identifier": "GO:0060373",
            "identifier_type": "str",
            "name": "regulation of ventricular cardiac muscle cell membrane depolarization",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060373",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18455,
            "identifier": "GO:0042119",
            "identifier_type": "str",
            "name": "neutrophil activation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0042119",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18456,
            "identifier": "2158",
            "identifier_type": "int",
            "name": "F9",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2158",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "coagulation factor IX"
            },
            "metanode": "Gene"
        },
        {
            "id": 18457,
            "identifier": "GO:2000170",
            "identifier_type": "str",
            "name": "positive regulation of peptidyl-cysteine S-nitrosylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000170",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18458,
            "identifier": "9895",
            "identifier_type": "int",
            "name": "TECPR2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9895",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "tectonin beta-propeller repeat containing 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 18459,
            "identifier": "91227",
            "identifier_type": "int",
            "name": "GGTLC2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/91227",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "gamma-glutamyltransferase light chain 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 18460,
            "identifier": "C0853312",
            "identifier_type": "str",
            "name": "Osteoarthritis aggravated",
            "properties": {
                "url": "http://identifiers.org/umls/C0853312",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 18461,
            "identifier": "6284",
            "identifier_type": "int",
            "name": "S100A13",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6284",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "S100 calcium binding protein A13"
            },
            "metanode": "Gene"
        },
        {
            "id": 18462,
            "identifier": "GO:1904018",
            "identifier_type": "str",
            "name": "positive regulation of vasculature development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904018",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18463,
            "identifier": "GO:0072594",
            "identifier_type": "str",
            "name": "establishment of protein localization to organelle",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072594",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18464,
            "identifier": "GO:0016180",
            "identifier_type": "str",
            "name": "snRNA processing",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016180",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18465,
            "identifier": "GO:0051096",
            "identifier_type": "str",
            "name": "positive regulation of helicase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051096",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18466,
            "identifier": "GO:2000107",
            "identifier_type": "str",
            "name": "negative regulation of leukocyte apoptotic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000107",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}