Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=18500

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=18525",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=18475",
    "results": [
        {
            "id": 18492,
            "identifier": "GO:1902170",
            "identifier_type": "str",
            "name": "cellular response to reactive nitrogen species",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902170",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18493,
            "identifier": "C3495947",
            "identifier_type": "str",
            "name": "Atypical stress fracture",
            "properties": {
                "url": "http://identifiers.org/umls/C3495947",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 18494,
            "identifier": "GO:0045926",
            "identifier_type": "str",
            "name": "negative regulation of growth",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045926",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18495,
            "identifier": "GO:0044871",
            "identifier_type": "str",
            "name": "negative regulation by host of viral glycoprotein metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0044871",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18496,
            "identifier": "160140",
            "identifier_type": "int",
            "name": "C11orf65",
            "properties": {
                "url": "http://identifiers.org/ncbigene/160140",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "chromosome 11 open reading frame 65"
            },
            "metanode": "Gene"
        },
        {
            "id": 18497,
            "identifier": "5063",
            "identifier_type": "int",
            "name": "PAK3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5063",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "p21 protein (Cdc42/Rac)-activated kinase 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 18498,
            "identifier": "54957",
            "identifier_type": "int",
            "name": "TXNL4B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54957",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "thioredoxin-like 4B"
            },
            "metanode": "Gene"
        },
        {
            "id": 18499,
            "identifier": "GO:0035967",
            "identifier_type": "str",
            "name": "cellular response to topologically incorrect protein",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035967",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18500,
            "identifier": "255488",
            "identifier_type": "int",
            "name": "RNF144B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/255488",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "ring finger protein 144B"
            },
            "metanode": "Gene"
        },
        {
            "id": 18501,
            "identifier": "C0152165",
            "identifier_type": "str",
            "name": "Persistent vomiting",
            "properties": {
                "url": "http://identifiers.org/umls/C0152165",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 18502,
            "identifier": "23030",
            "identifier_type": "int",
            "name": "KDM4B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23030",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "lysine (K)-specific demethylase 4B"
            },
            "metanode": "Gene"
        },
        {
            "id": 18503,
            "identifier": "7516",
            "identifier_type": "int",
            "name": "XRCC2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7516",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "X-ray repair complementing defective repair in Chinese hamster cells 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 18504,
            "identifier": "GO:0006720",
            "identifier_type": "str",
            "name": "isoprenoid metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006720",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18505,
            "identifier": "GO:1901979",
            "identifier_type": "str",
            "name": "regulation of inward rectifier potassium channel activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901979",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18506,
            "identifier": "26353",
            "identifier_type": "int",
            "name": "HSPB8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/26353",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "heat shock 22kDa protein 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 18507,
            "identifier": "55911",
            "identifier_type": "int",
            "name": "APOBR",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55911",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "apolipoprotein B receptor"
            },
            "metanode": "Gene"
        },
        {
            "id": 18508,
            "identifier": "102724334",
            "identifier_type": "int",
            "name": "LOC102724334",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102724334",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "21",
                "description": "histone H2B type F-S-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 18509,
            "identifier": "79444",
            "identifier_type": "int",
            "name": "BIRC7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79444",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "baculoviral IAP repeat containing 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 18510,
            "identifier": "GO:0051586",
            "identifier_type": "str",
            "name": "positive regulation of dopamine uptake involved in synaptic transmission",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051586",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18511,
            "identifier": "577",
            "identifier_type": "int",
            "name": "ADGRB3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/577",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "adhesion G protein-coupled receptor B3"
            },
            "metanode": "Gene"
        },
        {
            "id": 18512,
            "identifier": "9212",
            "identifier_type": "int",
            "name": "AURKB",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9212",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "aurora kinase B"
            },
            "metanode": "Gene"
        },
        {
            "id": 18513,
            "identifier": "50487",
            "identifier_type": "int",
            "name": "PLA2G3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/50487",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "phospholipase A2, group III"
            },
            "metanode": "Gene"
        },
        {
            "id": 18514,
            "identifier": "DB01583",
            "identifier_type": "str",
            "name": "Liotrix",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01583",
                "inchi": "InChI=1S/C15H11I4NO4.C15H12I3NO4.2Na/c16-8-4-7(5-9(17)13(8)21)24-14-10(18)1-6(2-11(14)19)3-12(20)15(22)23;16-9-6-8(1-2-13(9)20)23-14-10(17)3-7(4-11(14)18)5-12(19)15(21)22;;/h1-2,4-5,12,21H,3,20H2,(H,22,23);1-4,6,12,20H,5,19H2,(H,21,22);;/q;;2*+1/p-2/t2*12-;;/m00../s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=LKYWLLWWYBVUPP-XOCLESOZSA-L"
            },
            "metanode": "Compound"
        },
        {
            "id": 18515,
            "identifier": "3046",
            "identifier_type": "int",
            "name": "HBE1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3046",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "hemoglobin, epsilon 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 18516,
            "identifier": "57479",
            "identifier_type": "int",
            "name": "PRR12",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57479",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "proline rich 12"
            },
            "metanode": "Gene"
        }
    ]
}