Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=18800

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=18825",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=18775",
    "results": [
        {
            "id": 18792,
            "identifier": "84896",
            "identifier_type": "int",
            "name": "ATAD1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84896",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "ATPase family, AAA domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 18793,
            "identifier": "93659",
            "identifier_type": "int",
            "name": "CGB5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/93659",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "chorionic gonadotropin, beta polypeptide 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 18794,
            "identifier": "GO:0022010",
            "identifier_type": "str",
            "name": "central nervous system myelination",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0022010",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18795,
            "identifier": "GO:0071887",
            "identifier_type": "str",
            "name": "leukocyte apoptotic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071887",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18796,
            "identifier": "6915",
            "identifier_type": "int",
            "name": "TBXA2R",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6915",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "thromboxane A2 receptor"
            },
            "metanode": "Gene"
        },
        {
            "id": 18797,
            "identifier": "GO:0051255",
            "identifier_type": "str",
            "name": "spindle midzone assembly",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051255",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18798,
            "identifier": "GO:0052650",
            "identifier_type": "str",
            "name": "NADP-retinol dehydrogenase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0052650",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 18799,
            "identifier": "338662",
            "identifier_type": "int",
            "name": "OR8D4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/338662",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "olfactory receptor, family 8, subfamily D, member 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 18800,
            "identifier": "DB01072",
            "identifier_type": "str",
            "name": "Atazanavir",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01072",
                "inchi": "InChI=1S/C38H52N6O7/c1-37(2,3)31(41-35(48)50-7)33(46)40-29(22-25-14-10-9-11-15-25)30(45)24-44(43-34(47)32(38(4,5)6)42-36(49)51-8)23-26-17-19-27(20-18-26)28-16-12-13-21-39-28/h9-21,29-32,45H,22-24H2,1-8H3,(H,40,46)(H,41,48)(H,42,49)(H,43,47)/t29-,30-,31+,32+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=AXRYRYVKAWYZBR-GASGPIRDSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 18801,
            "identifier": "1747",
            "identifier_type": "int",
            "name": "DLX3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1747",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "distal-less homeobox 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 18802,
            "identifier": "GO:0035243",
            "identifier_type": "str",
            "name": "protein-arginine omega-N symmetric methyltransferase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035243",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 18803,
            "identifier": "730094",
            "identifier_type": "int",
            "name": "C16orf52",
            "properties": {
                "url": "http://identifiers.org/ncbigene/730094",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "chromosome 16 open reading frame 52"
            },
            "metanode": "Gene"
        },
        {
            "id": 18804,
            "identifier": "GO:0045658",
            "identifier_type": "str",
            "name": "regulation of neutrophil differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045658",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18805,
            "identifier": "GO:0010770",
            "identifier_type": "str",
            "name": "positive regulation of cell morphogenesis involved in differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010770",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18806,
            "identifier": "104",
            "identifier_type": "int",
            "name": "ADARB1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/104",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "21",
                "description": "adenosine deaminase, RNA-specific, B1"
            },
            "metanode": "Gene"
        },
        {
            "id": 18807,
            "identifier": "8611",
            "identifier_type": "int",
            "name": "PPAP2A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8611",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "phosphatidic acid phosphatase type 2A"
            },
            "metanode": "Gene"
        },
        {
            "id": 18808,
            "identifier": "23015",
            "identifier_type": "int",
            "name": "GOLGA8A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23015",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "golgin A8 family, member A"
            },
            "metanode": "Gene"
        },
        {
            "id": 18809,
            "identifier": "GO:0019864",
            "identifier_type": "str",
            "name": "IgG binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0019864",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 18810,
            "identifier": "GO:0000812",
            "identifier_type": "str",
            "name": "Swr1 complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000812",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 18811,
            "identifier": "285242",
            "identifier_type": "int",
            "name": "HTR3E",
            "properties": {
                "url": "http://identifiers.org/ncbigene/285242",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "5-hydroxytryptamine (serotonin) receptor 3E, ionotropic"
            },
            "metanode": "Gene"
        },
        {
            "id": 18812,
            "identifier": "57379",
            "identifier_type": "int",
            "name": "AICDA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57379",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "activation-induced cytidine deaminase"
            },
            "metanode": "Gene"
        },
        {
            "id": 18813,
            "identifier": "11064",
            "identifier_type": "int",
            "name": "CNTRL",
            "properties": {
                "url": "http://identifiers.org/ncbigene/11064",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "centriolin"
            },
            "metanode": "Gene"
        },
        {
            "id": 18814,
            "identifier": "GO:0009439",
            "identifier_type": "str",
            "name": "cyanate metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0009439",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18815,
            "identifier": "GO:0032876",
            "identifier_type": "str",
            "name": "negative regulation of DNA endoreduplication",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032876",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 18816,
            "identifier": "C0740394",
            "identifier_type": "str",
            "name": "Hyperuricaemia",
            "properties": {
                "url": "http://identifiers.org/umls/C0740394",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        }
    ]
}