Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=19225
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=19250", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=19200", "results": [ { "id": 19214, "identifier": "GO:0004320", "identifier_type": "str", "name": "oleoyl-[acyl-carrier-protein] hydrolase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0004320", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 19215, "identifier": "54554", "identifier_type": "int", "name": "WDR5B", "properties": { "url": "http://identifiers.org/ncbigene/54554", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "WD repeat domain 5B" }, "metanode": "Gene" }, { "id": 19216, "identifier": "117581", "identifier_type": "int", "name": "TWIST2", "properties": { "url": "http://identifiers.org/ncbigene/117581", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "twist family bHLH transcription factor 2" }, "metanode": "Gene" }, { "id": 19217, "identifier": "GO:0003169", "identifier_type": "str", "name": "coronary vein morphogenesis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0003169", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 19218, "identifier": "GO:1902523", "identifier_type": "str", "name": "positive regulation of protein K63-linked ubiquitination", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902523", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 19219, "identifier": "1295", "identifier_type": "int", "name": "COL8A1", "properties": { "url": "http://identifiers.org/ncbigene/1295", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "collagen, type VIII, alpha 1" }, "metanode": "Gene" }, { "id": 19220, "identifier": "9914", "identifier_type": "int", "name": "ATP2C2", "properties": { "url": "http://identifiers.org/ncbigene/9914", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "ATPase, Ca++ transporting, type 2C, member 2" }, "metanode": "Gene" }, { "id": 19221, "identifier": "PC7_2347", "identifier_type": "str", "name": "CRMPs in Sema3A signaling", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 19222, "identifier": "UBERON:0002516", "identifier_type": "str", "name": "epiphyseal plate", "properties": { "url": "http://purl.obolibrary.org/obo/UBERON_0002516", "bto_id": "BTO:0000412", "source": "Uberon", "license": "CC BY 3.0", "mesh_id": "D006132" }, "metanode": "Anatomy" }, { "id": 19224, "identifier": "3748", "identifier_type": "int", "name": "KCNC3", "properties": { "url": "http://identifiers.org/ncbigene/3748", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "potassium channel, voltage gated Shaw related subfamily C, member 3" }, "metanode": "Gene" }, { "id": 19225, "identifier": "WP2805_r81654", "identifier_type": "str", "name": "RNA interference", "properties": { "url": "http://www.wikipathways.org/instance/WP2805_r81654", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 19226, "identifier": "100130311", "identifier_type": "int", "name": "C17orf107", "properties": { "url": "http://identifiers.org/ncbigene/100130311", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "chromosome 17 open reading frame 107" }, "metanode": "Gene" }, { "id": 19227, "identifier": "C0345903", "identifier_type": "str", "name": "Anal skin tags", "properties": { "url": "http://identifiers.org/umls/C0345903", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 19228, "identifier": "GO:1904382", "identifier_type": "str", "name": "mannose trimming involved in glycoprotein ERAD pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1904382", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 19229, "identifier": "283987", "identifier_type": "int", "name": "HID1", "properties": { "url": "http://identifiers.org/ncbigene/283987", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "HID1 domain containing" }, "metanode": "Gene" }, { "id": 19230, "identifier": "10868", "identifier_type": "int", "name": "USP20", "properties": { "url": "http://identifiers.org/ncbigene/10868", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "ubiquitin specific peptidase 20" }, "metanode": "Gene" }, { "id": 19231, "identifier": "GO:0033153", "identifier_type": "str", "name": "T cell receptor V(D)J recombination", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0033153", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 19232, "identifier": "GO:0019992", "identifier_type": "str", "name": "diacylglycerol binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0019992", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 19233, "identifier": "WP58_r80015", "identifier_type": "str", "name": "Monoamine GPCRs", "properties": { "url": "http://www.wikipathways.org/instance/WP58_r80015", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 19234, "identifier": "155368", "identifier_type": "int", "name": "WBSCR27", "properties": { "url": "http://identifiers.org/ncbigene/155368", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "Williams Beuren syndrome chromosome region 27" }, "metanode": "Gene" }, { "id": 19235, "identifier": "51550", "identifier_type": "int", "name": "CINP", "properties": { "url": "http://identifiers.org/ncbigene/51550", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "cyclin-dependent kinase 2 interacting protein" }, "metanode": "Gene" }, { "id": 19236, "identifier": "C0022281", "identifier_type": "str", "name": "Eye pruritus", "properties": { "url": "http://identifiers.org/umls/C0022281", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 19237, "identifier": "GO:0021912", "identifier_type": "str", "name": "regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0021912", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 19238, "identifier": "GO:0038128", "identifier_type": "str", "name": "ERBB2 signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0038128", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 19239, "identifier": "C0231694", "identifier_type": "str", "name": "Festinating gait", "properties": { "url": "http://identifiers.org/umls/C0231694", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" } ] }