Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=19375

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=19400",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=19350",
    "results": [
        {
            "id": 19366,
            "identifier": "C0520571",
            "identifier_type": "str",
            "name": "Biliary fibrosis",
            "properties": {
                "url": "http://identifiers.org/umls/C0520571",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 19367,
            "identifier": "GO:0016655",
            "identifier_type": "str",
            "name": "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016655",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 19368,
            "identifier": "DB00938",
            "identifier_type": "str",
            "name": "Salmeterol",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00938",
                "inchi": "InChI=1S/C25H37NO4/c27-20-23-18-22(13-14-24(23)28)25(29)19-26-15-7-1-2-8-16-30-17-9-6-12-21-10-4-3-5-11-21/h3-5,10-11,13-14,18,25-29H,1-2,6-9,12,15-17,19-20H2",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=GIIZNNXWQWCKIB-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 19369,
            "identifier": "330",
            "identifier_type": "int",
            "name": "BIRC3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/330",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "baculoviral IAP repeat containing 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 19370,
            "identifier": "UBERON:0000026",
            "identifier_type": "str",
            "name": "appendage",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0000026",
                "bto_id": "BTO:0001492",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D005121"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 19371,
            "identifier": "8856",
            "identifier_type": "int",
            "name": "NR1I2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8856",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "nuclear receptor subfamily 1, group I, member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 19372,
            "identifier": "GO:0071044",
            "identifier_type": "str",
            "name": "histone mRNA catabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071044",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19373,
            "identifier": "C0019284",
            "identifier_type": "str",
            "name": "Diaphragmatic hernia",
            "properties": {
                "url": "http://identifiers.org/umls/C0019284",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 19374,
            "identifier": "81557",
            "identifier_type": "int",
            "name": "MAGED4B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/81557",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "melanoma antigen family D4B"
            },
            "metanode": "Gene"
        },
        {
            "id": 19375,
            "identifier": "C0017566",
            "identifier_type": "str",
            "name": "Gingival hyperplasia",
            "properties": {
                "url": "http://identifiers.org/umls/C0017566",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 19376,
            "identifier": "2690",
            "identifier_type": "int",
            "name": "GHR",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2690",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "growth hormone receptor"
            },
            "metanode": "Gene"
        },
        {
            "id": 19377,
            "identifier": "11325",
            "identifier_type": "int",
            "name": "DDX42",
            "properties": {
                "url": "http://identifiers.org/ncbigene/11325",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "DEAD (Asp-Glu-Ala-Asp) box helicase 42"
            },
            "metanode": "Gene"
        },
        {
            "id": 19378,
            "identifier": "29117",
            "identifier_type": "int",
            "name": "BRD7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/29117",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "bromodomain containing 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 19379,
            "identifier": "GO:0045659",
            "identifier_type": "str",
            "name": "negative regulation of neutrophil differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045659",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19380,
            "identifier": "GO:0090190",
            "identifier_type": "str",
            "name": "positive regulation of branching involved in ureteric bud morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090190",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19381,
            "identifier": "GO:0004912",
            "identifier_type": "str",
            "name": "interleukin-3 receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004912",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 19382,
            "identifier": "DB01036",
            "identifier_type": "str",
            "name": "Tolterodine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01036",
                "inchi": "InChI=1S/C22H31NO/c1-16(2)23(17(3)4)14-13-20(19-9-7-6-8-10-19)21-15-18(5)11-12-22(21)24/h6-12,15-17,20,24H,13-14H2,1-5H3/t20-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=OOGJQPCLVADCPB-HXUWFJFHSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 19383,
            "identifier": "PC7_5948",
            "identifier_type": "str",
            "name": "Nitric oxide stimulates guanylate cyclase",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 19384,
            "identifier": "160492",
            "identifier_type": "int",
            "name": "LMNTD1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/160492",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "lamin tail domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 19385,
            "identifier": "5159",
            "identifier_type": "int",
            "name": "PDGFRB",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5159",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "platelet-derived growth factor receptor, beta polypeptide"
            },
            "metanode": "Gene"
        },
        {
            "id": 19386,
            "identifier": "C0037384",
            "identifier_type": "str",
            "name": "Snoring",
            "properties": {
                "url": "http://identifiers.org/umls/C0037384",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 19387,
            "identifier": "GO:1904009",
            "identifier_type": "str",
            "name": "cellular response to monosodium glutamate",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904009",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19388,
            "identifier": "GO:0021943",
            "identifier_type": "str",
            "name": "formation of radial glial scaffolds",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021943",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19389,
            "identifier": "GO:0072413",
            "identifier_type": "str",
            "name": "signal transduction involved in mitotic cell cycle checkpoint",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072413",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19390,
            "identifier": "105371486",
            "identifier_type": "int",
            "name": "LOC105371486",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105371486",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "uncharacterized LOC105371486"
            },
            "metanode": "Gene"
        }
    ]
}