Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=19625

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=19650",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=19600",
    "results": [
        {
            "id": 19617,
            "identifier": "GO:0045901",
            "identifier_type": "str",
            "name": "positive regulation of translational elongation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045901",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19618,
            "identifier": "C2721563",
            "identifier_type": "str",
            "name": "Infectious pneumonitis",
            "properties": {
                "url": "http://identifiers.org/umls/C2721563",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 19619,
            "identifier": "81839",
            "identifier_type": "int",
            "name": "VANGL1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/81839",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "VANGL planar cell polarity protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 19620,
            "identifier": "27233",
            "identifier_type": "int",
            "name": "SULT1C4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/27233",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "sulfotransferase family, cytosolic, 1C, member 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 19621,
            "identifier": "2972",
            "identifier_type": "int",
            "name": "BRF1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2972",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit"
            },
            "metanode": "Gene"
        },
        {
            "id": 19622,
            "identifier": "57533",
            "identifier_type": "int",
            "name": "TBC1D14",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57533",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "TBC1 domain family, member 14"
            },
            "metanode": "Gene"
        },
        {
            "id": 19623,
            "identifier": "83550",
            "identifier_type": "int",
            "name": "GPR101",
            "properties": {
                "url": "http://identifiers.org/ncbigene/83550",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "G protein-coupled receptor 101"
            },
            "metanode": "Gene"
        },
        {
            "id": 19624,
            "identifier": "80324",
            "identifier_type": "int",
            "name": "PUS1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/80324",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "pseudouridylate synthase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 19625,
            "identifier": "GO:0002752",
            "identifier_type": "str",
            "name": "cell surface pattern recognition receptor signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002752",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19626,
            "identifier": "GO:0022627",
            "identifier_type": "str",
            "name": "cytosolic small ribosomal subunit",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0022627",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 19627,
            "identifier": "DB00721",
            "identifier_type": "str",
            "name": "Procaine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00721",
                "inchi": "InChI=1S/C13H20N2O2/c1-3-15(4-2)9-10-17-13(16)11-5-7-12(14)8-6-11/h5-8H,3-4,9-10,14H2,1-2H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=MFDFERRIHVXMIY-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 19628,
            "identifier": "51367",
            "identifier_type": "int",
            "name": "POP5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51367",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)"
            },
            "metanode": "Gene"
        },
        {
            "id": 19629,
            "identifier": "GO:1902236",
            "identifier_type": "str",
            "name": "negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902236",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19630,
            "identifier": "1018",
            "identifier_type": "int",
            "name": "CDK3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1018",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "cyclin-dependent kinase 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 19631,
            "identifier": "101928947",
            "identifier_type": "int",
            "name": "LOC101928947",
            "properties": {
                "url": "http://identifiers.org/ncbigene/101928947",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "uncharacterized LOC101928947"
            },
            "metanode": "Gene"
        },
        {
            "id": 19632,
            "identifier": "GO:0051209",
            "identifier_type": "str",
            "name": "release of sequestered calcium ion into cytosol",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051209",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19633,
            "identifier": "23520",
            "identifier_type": "int",
            "name": "ANP32C",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23520",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "acidic (leucine-rich) nuclear phosphoprotein 32 family, member C"
            },
            "metanode": "Gene"
        },
        {
            "id": 19634,
            "identifier": "8022",
            "identifier_type": "int",
            "name": "LHX3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8022",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "LIM homeobox 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 19635,
            "identifier": "53820",
            "identifier_type": "int",
            "name": "RIPPLY3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/53820",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "21",
                "description": "ripply transcriptional repressor 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 19636,
            "identifier": "WP2036_r84527",
            "identifier_type": "str",
            "name": "TWEAK Signaling Pathway",
            "properties": {
                "url": "http://www.wikipathways.org/instance/WP2036_r84527",
                "source": "WikiPathways",
                "license": "CC BY 3.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 19637,
            "identifier": "84232",
            "identifier_type": "int",
            "name": "MAF1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84232",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "MAF1 homolog (S. cerevisiae)"
            },
            "metanode": "Gene"
        },
        {
            "id": 19638,
            "identifier": "PC7_4941",
            "identifier_type": "str",
            "name": "LPA4-mediated signaling events",
            "properties": {
                "source": "PID via Pathway Commons",
                "license": "CC0 1.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 19639,
            "identifier": "114788",
            "identifier_type": "int",
            "name": "CSMD3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/114788",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "CUB and Sushi multiple domains 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 19640,
            "identifier": "GO:1902254",
            "identifier_type": "str",
            "name": "negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902254",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19641,
            "identifier": "GO:0018343",
            "identifier_type": "str",
            "name": "protein farnesylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0018343",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}