Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=19800

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=19825",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=19775",
    "results": [
        {
            "id": 19790,
            "identifier": "10175",
            "identifier_type": "int",
            "name": "CNIH1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10175",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "cornichon family AMPA receptor auxiliary protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 19791,
            "identifier": "63978",
            "identifier_type": "int",
            "name": "PRDM14",
            "properties": {
                "url": "http://identifiers.org/ncbigene/63978",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "PR domain containing 14"
            },
            "metanode": "Gene"
        },
        {
            "id": 19792,
            "identifier": "C0151821",
            "identifier_type": "str",
            "name": "Accidental overdose",
            "properties": {
                "url": "http://identifiers.org/umls/C0151821",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 19793,
            "identifier": "PC7_6589",
            "identifier_type": "str",
            "name": "Processing of Capped Intron-Containing Pre-mRNA",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 19794,
            "identifier": "493901",
            "identifier_type": "int",
            "name": "RNASE12",
            "properties": {
                "url": "http://identifiers.org/ncbigene/493901",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "ribonuclease, RNase A family, 12 (non-active)"
            },
            "metanode": "Gene"
        },
        {
            "id": 20149,
            "identifier": "C0028817",
            "identifier_type": "str",
            "name": "Ochronosis",
            "properties": {
                "url": "http://identifiers.org/umls/C0028817",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 19795,
            "identifier": "GO:2000645",
            "identifier_type": "str",
            "name": "negative regulation of receptor catabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000645",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19796,
            "identifier": "3993",
            "identifier_type": "int",
            "name": "LLGL2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3993",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "lethal giant larvae homolog 2 (Drosophila)"
            },
            "metanode": "Gene"
        },
        {
            "id": 19797,
            "identifier": "DB00959",
            "identifier_type": "str",
            "name": "Methylprednisolone",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00959",
                "inchi": "InChI=1S/C22H30O5/c1-12-8-14-15-5-7-22(27,18(26)11-23)21(15,3)10-17(25)19(14)20(2)6-4-13(24)9-16(12)20/h4,6,9,12,14-15,17,19,23,25,27H,5,7-8,10-11H2,1-3H3/t12-,14-,15-,17-,19+,20-,21-,22-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=VHRSUDSXCMQTMA-PJHHCJLFSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 19798,
            "identifier": "122748",
            "identifier_type": "int",
            "name": "OR11H6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/122748",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "olfactory receptor, family 11, subfamily H, member 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 19799,
            "identifier": "GO:0031111",
            "identifier_type": "str",
            "name": "negative regulation of microtubule polymerization or depolymerization",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0031111",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19800,
            "identifier": "11113",
            "identifier_type": "int",
            "name": "CIT",
            "properties": {
                "url": "http://identifiers.org/ncbigene/11113",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "citron rho-interacting serine/threonine kinase"
            },
            "metanode": "Gene"
        },
        {
            "id": 19801,
            "identifier": "GO:0050252",
            "identifier_type": "str",
            "name": "retinol O-fatty-acyltransferase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0050252",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 19802,
            "identifier": "GO:0030662",
            "identifier_type": "str",
            "name": "coated vesicle membrane",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030662",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 19803,
            "identifier": "DB01409",
            "identifier_type": "str",
            "name": "Tiotropium",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01409",
                "inchi": "InChI=1S/C19H22NO4S2/c1-20(2)12-9-11(10-13(20)17-16(12)24-17)23-18(21)19(22,14-5-3-7-25-14)15-6-4-8-26-15/h3-8,11-13,16-17,22H,9-10H2,1-2H3/q+1/t11?,12-,13+,16+,17-",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=LERNTVKEWCAPOY-KYQOMENCSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 19804,
            "identifier": "28952",
            "identifier_type": "int",
            "name": "CCDC22",
            "properties": {
                "url": "http://identifiers.org/ncbigene/28952",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "coiled-coil domain containing 22"
            },
            "metanode": "Gene"
        },
        {
            "id": 19805,
            "identifier": "4947",
            "identifier_type": "int",
            "name": "OAZ2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4947",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "ornithine decarboxylase antizyme 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 19806,
            "identifier": "54841",
            "identifier_type": "int",
            "name": "BIVM",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54841",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "basic, immunoglobulin-like variable motif containing"
            },
            "metanode": "Gene"
        },
        {
            "id": 19807,
            "identifier": "GO:0006891",
            "identifier_type": "str",
            "name": "intra-Golgi vesicle-mediated transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006891",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19808,
            "identifier": "C0860728",
            "identifier_type": "str",
            "name": "Osmolality increased",
            "properties": {
                "url": "http://identifiers.org/umls/C0860728",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 19809,
            "identifier": "53342",
            "identifier_type": "int",
            "name": "IL17D",
            "properties": {
                "url": "http://identifiers.org/ncbigene/53342",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "interleukin 17D"
            },
            "metanode": "Gene"
        },
        {
            "id": 19810,
            "identifier": "C0948482",
            "identifier_type": "str",
            "name": "Analgesic effect",
            "properties": {
                "url": "http://identifiers.org/umls/C0948482",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 19811,
            "identifier": "GO:0071394",
            "identifier_type": "str",
            "name": "cellular response to testosterone stimulus",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071394",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 19812,
            "identifier": "GO:0004741",
            "identifier_type": "str",
            "name": "[pyruvate dehydrogenase (lipoamide)] phosphatase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004741",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 19813,
            "identifier": "55795",
            "identifier_type": "int",
            "name": "PCID2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55795",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "PCI domain containing 2"
            },
            "metanode": "Gene"
        }
    ]
}