Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=20150
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=20175", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=20125", "results": [ { "id": 20139, "identifier": "GO:0043634", "identifier_type": "str", "name": "polyadenylation-dependent ncRNA catabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043634", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20140, "identifier": "4798", "identifier_type": "int", "name": "NFRKB", "properties": { "url": "http://identifiers.org/ncbigene/4798", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "nuclear factor related to kappaB binding protein" }, "metanode": "Gene" }, { "id": 20141, "identifier": "54820", "identifier_type": "int", "name": "NDE1", "properties": { "url": "http://identifiers.org/ncbigene/54820", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "nudE neurodevelopment protein 1" }, "metanode": "Gene" }, { "id": 20142, "identifier": "85360", "identifier_type": "int", "name": "SYDE1", "properties": { "url": "http://identifiers.org/ncbigene/85360", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "synapse defective 1, Rho GTPase, homolog 1 (C. elegans)" }, "metanode": "Gene" }, { "id": 20143, "identifier": "DB00888", "identifier_type": "str", "name": "Mechlorethamine", "properties": { "url": "http://www.drugbank.ca/drugs/DB00888", "inchi": "InChI=1S/C5H11Cl2N/c1-8(4-2-6)5-3-7/h2-5H2,1H3", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=HAWPXGHAZFHHAD-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 20144, "identifier": "GO:0098643", "identifier_type": "str", "name": "banded collagen fibril", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0098643", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 20145, "identifier": "22893", "identifier_type": "int", "name": "BAHD1", "properties": { "url": "http://identifiers.org/ncbigene/22893", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "bromo adjacent homology domain containing 1" }, "metanode": "Gene" }, { "id": 20146, "identifier": "7379", "identifier_type": "int", "name": "UPK2", "properties": { "url": "http://identifiers.org/ncbigene/7379", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "uroplakin 2" }, "metanode": "Gene" }, { "id": 20147, "identifier": "C1269955", "identifier_type": "str", "name": "Tumour invasion", "properties": { "url": "http://identifiers.org/umls/C1269955", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 20148, "identifier": "C1393815", "identifier_type": "str", "name": "Contraceptive device complication", "properties": { "url": "http://identifiers.org/umls/C1393815", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 20150, "identifier": "1955", "identifier_type": "int", "name": "MEGF9", "properties": { "url": "http://identifiers.org/ncbigene/1955", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "multiple EGF-like-domains 9" }, "metanode": "Gene" }, { "id": 20151, "identifier": "C0026636", "identifier_type": "str", "name": "Oral disorder", "properties": { "url": "http://identifiers.org/umls/C0026636", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 20152, "identifier": "PC7_12899", "identifier_type": "str", "name": "tRNA Aminoacylation", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 20153, "identifier": "102724197", "identifier_type": "int", "name": "LOC102724197", "properties": { "url": "http://identifiers.org/ncbigene/102724197", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "inactive gamma-glutamyltranspeptidase 2-like" }, "metanode": "Gene" }, { "id": 20154, "identifier": "GO:0003923", "identifier_type": "str", "name": "GPI-anchor transamidase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0003923", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 20155, "identifier": "UBERON:0003129", "identifier_type": "str", "name": "skull", "properties": { "url": "http://purl.obolibrary.org/obo/UBERON_0003129", "bto_id": "BTO:0001295", "source": "Uberon", "license": "CC BY 3.0", "mesh_id": "D012886" }, "metanode": "Anatomy" }, { "id": 20156, "identifier": "312", "identifier_type": "int", "name": "ANXA13", "properties": { "url": "http://identifiers.org/ncbigene/312", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "annexin A13" }, "metanode": "Gene" }, { "id": 20157, "identifier": "9075", "identifier_type": "int", "name": "CLDN2", "properties": { "url": "http://identifiers.org/ncbigene/9075", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "claudin 2" }, "metanode": "Gene" }, { "id": 20158, "identifier": "C0595879", "identifier_type": "str", "name": "Sodium high", "properties": { "url": "http://identifiers.org/umls/C0595879", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 20159, "identifier": "728373", "identifier_type": "int", "name": "USP17L25", "properties": { "url": "http://identifiers.org/ncbigene/728373", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "ubiquitin specific peptidase 17-like family member 25" }, "metanode": "Gene" }, { "id": 20160, "identifier": "GO:0035520", "identifier_type": "str", "name": "monoubiquitinated protein deubiquitination", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0035520", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20161, "identifier": "2909", "identifier_type": "int", "name": "ARHGAP35", "properties": { "url": "http://identifiers.org/ncbigene/2909", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "Rho GTPase activating protein 35" }, "metanode": "Gene" }, { "id": 20162, "identifier": "GO:0016405", "identifier_type": "str", "name": "CoA-ligase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0016405", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 20163, "identifier": "57470", "identifier_type": "int", "name": "LRRC47", "properties": { "url": "http://identifiers.org/ncbigene/57470", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "leucine rich repeat containing 47" }, "metanode": "Gene" }, { "id": 20164, "identifier": "PC7_4267", "identifier_type": "str", "name": "Glycogen synthesis", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" } ] }