Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=20300

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=20325",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=20275",
    "results": [
        {
            "id": 20289,
            "identifier": "51063",
            "identifier_type": "int",
            "name": "CALHM2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51063",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "calcium homeostasis modulator 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 20290,
            "identifier": "GO:0055123",
            "identifier_type": "str",
            "name": "digestive system development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0055123",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20291,
            "identifier": "GO:2000121",
            "identifier_type": "str",
            "name": "regulation of removal of superoxide radicals",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000121",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20292,
            "identifier": "C0007274",
            "identifier_type": "str",
            "name": "Carotid artery thrombosis",
            "properties": {
                "url": "http://identifiers.org/umls/C0007274",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 20293,
            "identifier": "GO:0045987",
            "identifier_type": "str",
            "name": "positive regulation of smooth muscle contraction",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045987",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20759,
            "identifier": "GO:1990777",
            "identifier_type": "str",
            "name": "lipoprotein particle",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1990777",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 20294,
            "identifier": "GO:0045630",
            "identifier_type": "str",
            "name": "positive regulation of T-helper 2 cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045630",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20295,
            "identifier": "GO:0032652",
            "identifier_type": "str",
            "name": "regulation of interleukin-1 production",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032652",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20296,
            "identifier": "130612",
            "identifier_type": "int",
            "name": "TMEM198",
            "properties": {
                "url": "http://identifiers.org/ncbigene/130612",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "transmembrane protein 198"
            },
            "metanode": "Gene"
        },
        {
            "id": 20297,
            "identifier": "C0042963",
            "identifier_type": "str",
            "name": "Vomiting",
            "properties": {
                "url": "http://identifiers.org/umls/C0042963",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 20298,
            "identifier": "29952",
            "identifier_type": "int",
            "name": "DPP7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/29952",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "dipeptidyl-peptidase 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 20299,
            "identifier": "5819",
            "identifier_type": "int",
            "name": "PVRL2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5819",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "poliovirus receptor-related 2 (herpesvirus entry mediator B)"
            },
            "metanode": "Gene"
        },
        {
            "id": 20300,
            "identifier": "10486",
            "identifier_type": "int",
            "name": "CAP2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10486",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "CAP, adenylate cyclase-associated protein, 2 (yeast)"
            },
            "metanode": "Gene"
        },
        {
            "id": 20301,
            "identifier": "DB00623",
            "identifier_type": "str",
            "name": "Fluphenazine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00623",
                "inchi": "InChI=1S/C22H26F3N3OS/c23-22(24,25)17-6-7-21-19(16-17)28(18-4-1-2-5-20(18)30-21)9-3-8-26-10-12-27(13-11-26)14-15-29/h1-2,4-7,16,29H,3,8-15H2",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=PLDUPXSUYLZYBN-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 20302,
            "identifier": "PC7_6638",
            "identifier_type": "str",
            "name": "Prostacyclin signalling through prostacyclin receptor",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 20303,
            "identifier": "GO:0016899",
            "identifier_type": "str",
            "name": "oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016899",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 20304,
            "identifier": "GO:2000193",
            "identifier_type": "str",
            "name": "positive regulation of fatty acid transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000193",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20305,
            "identifier": "65094",
            "identifier_type": "int",
            "name": "JMJD4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/65094",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "jumonji domain containing 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 20306,
            "identifier": "286058",
            "identifier_type": "int",
            "name": "LOC286058",
            "properties": {
                "url": "http://identifiers.org/ncbigene/286058",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "uncharacterized LOC286058"
            },
            "metanode": "Gene"
        },
        {
            "id": 20307,
            "identifier": "643802",
            "identifier_type": "int",
            "name": "LOC643802",
            "properties": {
                "url": "http://identifiers.org/ncbigene/643802",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "u3 small nucleolar ribonucleoprotein protein MPP10-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 20308,
            "identifier": "9690",
            "identifier_type": "int",
            "name": "UBE3C",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9690",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "ubiquitin protein ligase E3C"
            },
            "metanode": "Gene"
        },
        {
            "id": 20309,
            "identifier": "GO:0044336",
            "identifier_type": "str",
            "name": "canonical Wnt signaling pathway involved in negative regulation of apoptotic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0044336",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20310,
            "identifier": "C0086439",
            "identifier_type": "str",
            "name": "Hypokinesia",
            "properties": {
                "url": "http://identifiers.org/umls/C0086439",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 20311,
            "identifier": "84626",
            "identifier_type": "int",
            "name": "KRBA1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84626",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "KRAB-A domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 20312,
            "identifier": "DB04574",
            "identifier_type": "str",
            "name": "Estropipate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB04574",
                "inchi": "InChI=1S/C18H22O5S/c1-18-9-8-14-13-5-3-12(23-24(20,21)22)10-11(13)2-4-15(14)16(18)6-7-17(18)19/h3,5,10,14-16H,2,4,6-9H2,1H3,(H,20,21,22)/t14-,15-,16+,18+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=JKKFKPJIXZFSSB-CBZIJGRNSA-N"
            },
            "metanode": "Compound"
        }
    ]
}