Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=20450
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=20475", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=20425", "results": [ { "id": 20440, "identifier": "2308", "identifier_type": "int", "name": "FOXO1", "properties": { "url": "http://identifiers.org/ncbigene/2308", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "13", "description": "forkhead box O1" }, "metanode": "Gene" }, { "id": 20441, "identifier": "10943", "identifier_type": "int", "name": "MSL3", "properties": { "url": "http://identifiers.org/ncbigene/10943", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "male-specific lethal 3 homolog (Drosophila)" }, "metanode": "Gene" }, { "id": 20442, "identifier": "GO:0005157", "identifier_type": "str", "name": "macrophage colony-stimulating factor receptor binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005157", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 20443, "identifier": "4761", "identifier_type": "int", "name": "NEUROD2", "properties": { "url": "http://identifiers.org/ncbigene/4761", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "neuronal differentiation 2" }, "metanode": "Gene" }, { "id": 20444, "identifier": "54799", "identifier_type": "int", "name": "MBTD1", "properties": { "url": "http://identifiers.org/ncbigene/54799", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "mbt domain containing 1" }, "metanode": "Gene" }, { "id": 20445, "identifier": "C0037997", "identifier_type": "str", "name": "Spleen disorder", "properties": { "url": "http://identifiers.org/umls/C0037997", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 20446, "identifier": "PC7_6649", "identifier_type": "str", "name": "Purine catabolism", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 20447, "identifier": "22856", "identifier_type": "int", "name": "CHSY1", "properties": { "url": "http://identifiers.org/ncbigene/22856", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "chondroitin sulfate synthase 1" }, "metanode": "Gene" }, { "id": 20448, "identifier": "DB00461", "identifier_type": "str", "name": "Nabumetone", "properties": { "url": "http://www.drugbank.ca/drugs/DB00461", "inchi": "InChI=1S/C15H16O2/c1-11(16)3-4-12-5-6-14-10-15(17-2)8-7-13(14)9-12/h5-10H,3-4H2,1-2H3", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=BLXXJMDCKKHMKV-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 20449, "identifier": "DB00294", "identifier_type": "str", "name": "Etonogestrel", "properties": { "url": "http://www.drugbank.ca/drugs/DB00294", "inchi": "InChI=1S/C22H28O2/c1-4-21-13-14(3)20-17-9-7-16(23)12-15(17)6-8-18(20)19(21)10-11-22(21,24)5-2/h2,12,17-20,24H,3-4,6-11,13H2,1H3/t17-,18-,19-,20+,21-,22-/m0/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=GCKFUYQCUCGESZ-BPIQYHPVSA-N" }, "metanode": "Compound" }, { "id": 20450, "identifier": "GO:0051204", "identifier_type": "str", "name": "protein insertion into mitochondrial membrane", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0051204", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20451, "identifier": "GO:0050862", "identifier_type": "str", "name": "positive regulation of T cell receptor signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0050862", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20452, "identifier": "55609", "identifier_type": "int", "name": "ZNF280C", "properties": { "url": "http://identifiers.org/ncbigene/55609", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "zinc finger protein 280C" }, "metanode": "Gene" }, { "id": 20453, "identifier": "GO:0061547", "identifier_type": "str", "name": "glycogen synthase activity, transferring glucose-1-phosphate", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0061547", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 20454, "identifier": "79158", "identifier_type": "int", "name": "GNPTAB", "properties": { "url": "http://identifiers.org/ncbigene/79158", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits" }, "metanode": "Gene" }, { "id": 20455, "identifier": "GO:0043383", "identifier_type": "str", "name": "negative T cell selection", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043383", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20456, "identifier": "GO:0034314", "identifier_type": "str", "name": "Arp2/3 complex-mediated actin nucleation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0034314", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20457, "identifier": "GO:0030165", "identifier_type": "str", "name": "PDZ domain binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030165", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 20458, "identifier": "291", "identifier_type": "int", "name": "SLC25A4", "properties": { "url": "http://identifiers.org/ncbigene/291", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4" }, "metanode": "Gene" }, { "id": 20459, "identifier": "9054", "identifier_type": "int", "name": "NFS1", "properties": { "url": "http://identifiers.org/ncbigene/9054", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "NFS1 cysteine desulfurase" }, "metanode": "Gene" }, { "id": 20460, "identifier": "GO:0071850", "identifier_type": "str", "name": "mitotic cell cycle arrest", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0071850", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20461, "identifier": "GO:0008358", "identifier_type": "str", "name": "maternal determination of anterior/posterior axis, embryo", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0008358", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20462, "identifier": "GO:0048489", "identifier_type": "str", "name": "synaptic vesicle transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048489", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20463, "identifier": "2744", "identifier_type": "int", "name": "GLS", "properties": { "url": "http://identifiers.org/ncbigene/2744", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "glutaminase" }, "metanode": "Gene" }, { "id": 20464, "identifier": "10014", "identifier_type": "int", "name": "HDAC5", "properties": { "url": "http://identifiers.org/ncbigene/10014", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "histone deacetylase 5" }, "metanode": "Gene" } ] }