Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=20600
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=20625", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=20575", "results": [ { "id": 20590, "identifier": "N0000008053", "identifier_type": "str", "name": "Sulfones", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000008053", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Chemical/Ingredient" }, "metanode": "Pharmacologic Class" }, { "id": 20591, "identifier": "1004", "identifier_type": "int", "name": "CDH6", "properties": { "url": "http://identifiers.org/ncbigene/1004", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "cadherin 6, type 2, K-cadherin (fetal kidney)" }, "metanode": "Gene" }, { "id": 20592, "identifier": "51026", "identifier_type": "int", "name": "GOLT1B", "properties": { "url": "http://identifiers.org/ncbigene/51026", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "golgi transport 1B" }, "metanode": "Gene" }, { "id": 20593, "identifier": "GO:1903827", "identifier_type": "str", "name": "regulation of cellular protein localization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903827", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20594, "identifier": "C0020640", "identifier_type": "str", "name": "Factor II deficiency", "properties": { "url": "http://identifiers.org/umls/C0020640", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 20595, "identifier": "PC7_1631", "identifier_type": "str", "name": "Amino acid synthesis and interconversion (transamination)", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 20596, "identifier": "UBERON:0001675", "identifier_type": "str", "name": "trigeminal ganglion", "properties": { "url": "http://purl.obolibrary.org/obo/UBERON_0001675", "bto_id": "BTO:0001231", "source": "Uberon", "license": "CC BY 3.0", "mesh_id": "D012668" }, "metanode": "Anatomy" }, { "id": 20597, "identifier": "GO:0005721", "identifier_type": "str", "name": "pericentric heterochromatin", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005721", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 20598, "identifier": "3329", "identifier_type": "int", "name": "HSPD1", "properties": { "url": "http://identifiers.org/ncbigene/3329", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "heat shock 60kDa protein 1 (chaperonin)" }, "metanode": "Gene" }, { "id": 20599, "identifier": "GO:2000471", "identifier_type": "str", "name": "regulation of hematopoietic stem cell migration", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000471", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20600, "identifier": "GO:0060123", "identifier_type": "str", "name": "regulation of growth hormone secretion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0060123", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20601, "identifier": "5798", "identifier_type": "int", "name": "PTPRN", "properties": { "url": "http://identifiers.org/ncbigene/5798", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "protein tyrosine phosphatase, receptor type, N" }, "metanode": "Gene" }, { "id": 20602, "identifier": "10449", "identifier_type": "int", "name": "ACAA2", "properties": { "url": "http://identifiers.org/ncbigene/10449", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "18", "description": "acetyl-CoA acyltransferase 2" }, "metanode": "Gene" }, { "id": 20603, "identifier": "60487", "identifier_type": "int", "name": "TRMT11", "properties": { "url": "http://identifiers.org/ncbigene/60487", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "tRNA methyltransferase 11 homolog (S. cerevisiae)" }, "metanode": "Gene" }, { "id": 20604, "identifier": "167410", "identifier_type": "int", "name": "LIX1", "properties": { "url": "http://identifiers.org/ncbigene/167410", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "Lix1 homolog (chicken)" }, "metanode": "Gene" }, { "id": 20605, "identifier": "4942", "identifier_type": "int", "name": "OAT", "properties": { "url": "http://identifiers.org/ncbigene/4942", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "ornithine aminotransferase" }, "metanode": "Gene" }, { "id": 20606, "identifier": "DB08842", "identifier_type": "str", "name": "Acetylcarnitine", "properties": { "url": "http://www.drugbank.ca/drugs/DB08842", "inchi": "InChI=1/C9H17NO4/c1-7(11)14-8(5-9(12)13)6-10(2,3)4/h8H,5-6H2,1-4H3/p+1/t8-/s2", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=RDHQFKQIGNGIED-SVGMAFHSNA-O" }, "metanode": "Compound" }, { "id": 20607, "identifier": "GO:0090662", "identifier_type": "str", "name": "ATP hydrolysis coupled transmembrane transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0090662", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20608, "identifier": "4155", "identifier_type": "int", "name": "MBP", "properties": { "url": "http://identifiers.org/ncbigene/4155", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "18", "description": "myelin basic protein" }, "metanode": "Gene" }, { "id": 20609, "identifier": "GO:0048633", "identifier_type": "str", "name": "positive regulation of skeletal muscle tissue growth", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048633", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 20610, "identifier": "PC7_1669", "identifier_type": "str", "name": "Antigen Presentation: Folding, assembly and peptide loading of class I MHC", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 20611, "identifier": "84733", "identifier_type": "int", "name": "CBX2", "properties": { "url": "http://identifiers.org/ncbigene/84733", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "chromobox homolog 2" }, "metanode": "Gene" }, { "id": 20612, "identifier": "161829", "identifier_type": "int", "name": "EXD1", "properties": { "url": "http://identifiers.org/ncbigene/161829", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "exonuclease 3'-5' domain containing 1" }, "metanode": "Gene" }, { "id": 20613, "identifier": "6736", "identifier_type": "int", "name": "SRY", "properties": { "url": "http://identifiers.org/ncbigene/6736", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "Y", "description": "sex determining region Y" }, "metanode": "Gene" }, { "id": 20615, "identifier": "257177", "identifier_type": "int", "name": "CFAP126", "properties": { "url": "http://identifiers.org/ncbigene/257177", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "cilia and flagella associated protein 126" }, "metanode": "Gene" } ] }