Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=20800

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=20825",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=20775",
    "results": [
        {
            "id": 20792,
            "identifier": "GO:0000308",
            "identifier_type": "str",
            "name": "cytoplasmic cyclin-dependent protein kinase holoenzyme complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000308",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 20793,
            "identifier": "PC7_4467",
            "identifier_type": "str",
            "name": "Hh ligand biogenesis disease",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 20794,
            "identifier": "GO:0045792",
            "identifier_type": "str",
            "name": "negative regulation of cell size",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045792",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20828,
            "identifier": "C1504376",
            "identifier_type": "str",
            "name": "Unresponsive to verbal stimuli",
            "properties": {
                "url": "http://identifiers.org/umls/C1504376",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 20795,
            "identifier": "DB00152",
            "identifier_type": "str",
            "name": "Thiamine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00152",
                "inchi": "InChI=1S/C12H17N4OS/c1-8-11(3-4-17)18-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7,17H,3-4,6H2,1-2H3,(H2,13,14,15)/q+1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=JZRWCGZRTZMZEH-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 20796,
            "identifier": "29889",
            "identifier_type": "int",
            "name": "GNL2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/29889",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "guanine nucleotide binding protein-like 2 (nucleolar)"
            },
            "metanode": "Gene"
        },
        {
            "id": 20797,
            "identifier": "C0235095",
            "identifier_type": "str",
            "name": "Visual field constriction",
            "properties": {
                "url": "http://identifiers.org/umls/C0235095",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 20798,
            "identifier": "GO:0002865",
            "identifier_type": "str",
            "name": "negative regulation of acute inflammatory response to antigenic stimulus",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002865",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20799,
            "identifier": "GO:0016493",
            "identifier_type": "str",
            "name": "C-C chemokine receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016493",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 20800,
            "identifier": "GO:0048702",
            "identifier_type": "str",
            "name": "embryonic neurocranium morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048702",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20801,
            "identifier": "23595",
            "identifier_type": "int",
            "name": "ORC3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23595",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "origin recognition complex, subunit 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 20802,
            "identifier": "GO:0030029",
            "identifier_type": "str",
            "name": "actin filament-based process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030029",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20803,
            "identifier": "DB06696",
            "identifier_type": "str",
            "name": "Arbekacin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB06696",
                "inchi": "InChI=1S/C22H44N6O10/c23-4-3-12(30)20(34)28-11-5-10(26)18(37-21-9(25)2-1-8(6-24)35-21)17(33)19(11)38-22-16(32)14(27)15(31)13(7-29)36-22/h8-19,21-22,29-33H,1-7,23-27H2,(H,28,34)/t8-,9+,10-,11+,12-,13+,14-,15+,16+,17-,18+,19-,21+,22+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=MKKYBZZTJQGVCD-XTCKQBCOSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 20804,
            "identifier": "377007",
            "identifier_type": "int",
            "name": "KLHL30",
            "properties": {
                "url": "http://identifiers.org/ncbigene/377007",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "kelch-like family member 30"
            },
            "metanode": "Gene"
        },
        {
            "id": 20805,
            "identifier": "149499",
            "identifier_type": "int",
            "name": "LRRC71",
            "properties": {
                "url": "http://identifiers.org/ncbigene/149499",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "leucine rich repeat containing 71"
            },
            "metanode": "Gene"
        },
        {
            "id": 20806,
            "identifier": "GO:0071564",
            "identifier_type": "str",
            "name": "npBAF complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071564",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 20807,
            "identifier": "GO:0031225",
            "identifier_type": "str",
            "name": "anchored component of membrane",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0031225",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 20808,
            "identifier": "PC7_2584",
            "identifier_type": "str",
            "name": "Circadian rhythm pathway",
            "properties": {
                "source": "PID via Pathway Commons",
                "license": "CC0 1.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 20809,
            "identifier": "UBERON:0001194",
            "identifier_type": "str",
            "name": "splenic artery",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0001194",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D013157"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 20810,
            "identifier": "1158",
            "identifier_type": "int",
            "name": "CKM",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1158",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "creatine kinase, muscle"
            },
            "metanode": "Gene"
        },
        {
            "id": 20811,
            "identifier": "9777",
            "identifier_type": "int",
            "name": "TM9SF4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9777",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "transmembrane 9 superfamily protein member 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 20812,
            "identifier": "DB00776",
            "identifier_type": "str",
            "name": "Oxcarbazepine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00776",
                "inchi": "InChI=1S/C15H12N2O2/c16-15(19)17-12-7-3-1-5-10(12)9-14(18)11-6-2-4-8-13(11)17/h1-8H,9H2,(H2,16,19)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=CTRLABGOLIVAIY-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 20813,
            "identifier": "GO:0097676",
            "identifier_type": "str",
            "name": "histone H3-K36 dimethylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0097676",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20814,
            "identifier": "340526",
            "identifier_type": "int",
            "name": "RGAG4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/340526",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "retrotransposon gag domain containing 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 20815,
            "identifier": "8702",
            "identifier_type": "int",
            "name": "B4GALT4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8702",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4"
            },
            "metanode": "Gene"
        }
    ]
}