Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=20850

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=20875",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=20825",
    "results": [
        {
            "id": 20842,
            "identifier": "646962",
            "identifier_type": "int",
            "name": "HRCT1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/646962",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "histidine rich carboxyl terminus 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 20843,
            "identifier": "GO:0070315",
            "identifier_type": "str",
            "name": "G1 to G0 transition involved in cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070315",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 20844,
            "identifier": "DB02703",
            "identifier_type": "str",
            "name": "Fusidic Acid",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB02703",
                "inchi": "InChI=1S/C31H48O6/c1-17(2)9-8-10-20(28(35)36)26-22-15-24(34)27-29(5)13-12-23(33)18(3)21(29)11-14-30(27,6)31(22,7)16-25(26)37-19(4)32/h9,18,21-25,27,33-34H,8,10-16H2,1-7H3,(H,35,36)/b26-20-/t18-,21-,22-,23+,24+,25-,27-,29-,30-,31-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=IECPWNUMDGFDKC-MZJAQBGESA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 20845,
            "identifier": "2548",
            "identifier_type": "int",
            "name": "GAA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2548",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "glucosidase, alpha; acid"
            },
            "metanode": "Gene"
        },
        {
            "id": 20846,
            "identifier": "11055",
            "identifier_type": "int",
            "name": "ZPBP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/11055",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "zona pellucida binding protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 20847,
            "identifier": "C1735634",
            "identifier_type": "str",
            "name": "Acute allograft rejection",
            "properties": {
                "url": "http://identifiers.org/umls/C1735634",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 20848,
            "identifier": "55039",
            "identifier_type": "int",
            "name": "TRMT12",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55039",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "tRNA methyltransferase 12 homolog (S. cerevisiae)"
            },
            "metanode": "Gene"
        },
        {
            "id": 20849,
            "identifier": "85451",
            "identifier_type": "int",
            "name": "UNK",
            "properties": {
                "url": "http://identifiers.org/ncbigene/85451",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "unkempt family zinc finger"
            },
            "metanode": "Gene"
        },
        {
            "id": 20850,
            "identifier": "C0005745",
            "identifier_type": "str",
            "name": "Eyelid ptosis",
            "properties": {
                "url": "http://identifiers.org/umls/C0005745",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 20851,
            "identifier": "780",
            "identifier_type": "int",
            "name": "DDR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/780",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "discoidin domain receptor tyrosine kinase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 20852,
            "identifier": "7342",
            "identifier_type": "int",
            "name": "UBP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7342",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "upstream binding protein 1 (LBP-1a)"
            },
            "metanode": "Gene"
        },
        {
            "id": 20853,
            "identifier": "3291",
            "identifier_type": "int",
            "name": "HSD11B2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3291",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "hydroxysteroid (11-beta) dehydrogenase 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 20854,
            "identifier": "C1704373",
            "identifier_type": "str",
            "name": "Compulsive personality disorder",
            "properties": {
                "url": "http://identifiers.org/umls/C1704373",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 20855,
            "identifier": "55721",
            "identifier_type": "int",
            "name": "IQCC",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55721",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "IQ motif containing C"
            },
            "metanode": "Gene"
        },
        {
            "id": 20856,
            "identifier": "442186",
            "identifier_type": "int",
            "name": "OR2J3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/442186",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "olfactory receptor, family 2, subfamily J, member 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 20857,
            "identifier": "645073",
            "identifier_type": "int",
            "name": "GAGE12G",
            "properties": {
                "url": "http://identifiers.org/ncbigene/645073",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "G antigen 12G"
            },
            "metanode": "Gene"
        },
        {
            "id": 20858,
            "identifier": "C1142335",
            "identifier_type": "str",
            "name": "Bilirubin abnormal",
            "properties": {
                "url": "http://identifiers.org/umls/C1142335",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 20859,
            "identifier": "403",
            "identifier_type": "int",
            "name": "ARL3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/403",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "ADP-ribosylation factor-like 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 20860,
            "identifier": "9166",
            "identifier_type": "int",
            "name": "EBAG9",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9166",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "estrogen receptor binding site associated, antigen, 9"
            },
            "metanode": "Gene"
        },
        {
            "id": 20861,
            "identifier": "GO:0005041",
            "identifier_type": "str",
            "name": "low-density lipoprotein receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005041",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 20862,
            "identifier": "PC7_3319",
            "identifier_type": "str",
            "name": "Double-Strand Break Repair",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 20897,
            "identifier": "9474",
            "identifier_type": "int",
            "name": "ATG5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9474",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "autophagy related 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 20863,
            "identifier": "DB01160",
            "identifier_type": "str",
            "name": "Dinoprost Tromethamine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01160",
                "inchi": "InChI=1S/C20H34O5.C4H11NO3/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25;5-4(1-6,2-7)3-8/h4,7,12-13,15-19,21-23H,2-3,5-6,8-11,14H2,1H3,(H,24,25);6-8H,1-3,5H2/b7-4-,13-12+;/t15-,16+,17+,18-,19+;/m0./s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=IYGXEHDCSOYNKY-RZHHZEQLSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 20864,
            "identifier": "27133",
            "identifier_type": "int",
            "name": "KCNH5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/27133",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "potassium channel, voltage gated eag related subfamily H, member 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 20865,
            "identifier": "GO:1904264",
            "identifier_type": "str",
            "name": "ubiquitin protein ligase activity involved in ERAD pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904264",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        }
    ]
}