Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=21425
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=21450", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=21400", "results": [ { "id": 21416, "identifier": "5698", "identifier_type": "int", "name": "PSMB9", "properties": { "url": "http://identifiers.org/ncbigene/5698", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "proteasome (prosome, macropain) subunit, beta type, 9" }, "metanode": "Gene" }, { "id": 21417, "identifier": "51496", "identifier_type": "int", "name": "CTDSPL2", "properties": { "url": "http://identifiers.org/ncbigene/51496", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2" }, "metanode": "Gene" }, { "id": 21418, "identifier": "54093", "identifier_type": "int", "name": "SETD4", "properties": { "url": "http://identifiers.org/ncbigene/54093", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "21", "description": "SET domain containing 4" }, "metanode": "Gene" }, { "id": 21419, "identifier": "GO:0030968", "identifier_type": "str", "name": "endoplasmic reticulum unfolded protein response", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030968", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21420, "identifier": "GO:0006368", "identifier_type": "str", "name": "transcription elongation from RNA polymerase II promoter", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006368", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21421, "identifier": "GO:0035284", "identifier_type": "str", "name": "brain segmentation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0035284", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21422, "identifier": "GO:0072431", "identifier_type": "str", "name": "signal transduction involved in mitotic G1 DNA damage checkpoint", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0072431", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21423, "identifier": "6524", "identifier_type": "int", "name": "SLC5A2", "properties": { "url": "http://identifiers.org/ncbigene/6524", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "solute carrier family 5 (sodium/glucose cotransporter), member 2" }, "metanode": "Gene" }, { "id": 21424, "identifier": "C0006848", "identifier_type": "str", "name": "Mucocutaneous candidiasis", "properties": { "url": "http://identifiers.org/umls/C0006848", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 21425, "identifier": "GO:0006906", "identifier_type": "str", "name": "vesicle fusion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006906", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21426, "identifier": "PC7_2524", "identifier_type": "str", "name": "Cell junction organization", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 21427, "identifier": "140807", "identifier_type": "int", "name": "KRT72", "properties": { "url": "http://identifiers.org/ncbigene/140807", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "keratin 72, type II" }, "metanode": "Gene" }, { "id": 21428, "identifier": "51122", "identifier_type": "int", "name": "COMMD2", "properties": { "url": "http://identifiers.org/ncbigene/51122", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "COMM domain containing 2" }, "metanode": "Gene" }, { "id": 21429, "identifier": "GO:0051418", "identifier_type": "str", "name": "microtubule nucleation by microtubule organizing center", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0051418", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21430, "identifier": "GO:0007169", "identifier_type": "str", "name": "transmembrane receptor protein tyrosine kinase signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0007169", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21431, "identifier": "340596", "identifier_type": "int", "name": "LHFPL1", "properties": { "url": "http://identifiers.org/ncbigene/340596", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "lipoma HMGIC fusion partner-like 1" }, "metanode": "Gene" }, { "id": 21432, "identifier": "105379290", "identifier_type": "int", "name": "LOC105379290", "properties": { "url": "http://identifiers.org/ncbigene/105379290", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "uncharacterized LOC105379290" }, "metanode": "Gene" }, { "id": 21433, "identifier": "C1698818", "identifier_type": "str", "name": "Photodamaged skin", "properties": { "url": "http://identifiers.org/umls/C1698818", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 21434, "identifier": "3681", "identifier_type": "int", "name": "ITGAD", "properties": { "url": "http://identifiers.org/ncbigene/3681", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "integrin, alpha D" }, "metanode": "Gene" }, { "id": 21435, "identifier": "GO:0070492", "identifier_type": "str", "name": "oligosaccharide binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0070492", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 21436, "identifier": "80777", "identifier_type": "int", "name": "CYB5B", "properties": { "url": "http://identifiers.org/ncbigene/80777", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "cytochrome b5 type B (outer mitochondrial membrane)" }, "metanode": "Gene" }, { "id": 21437, "identifier": "GO:0060465", "identifier_type": "str", "name": "pharynx development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0060465", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21438, "identifier": "GO:0046465", "identifier_type": "str", "name": "dolichyl diphosphate metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0046465", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21439, "identifier": "286133", "identifier_type": "int", "name": "SCARA5", "properties": { "url": "http://identifiers.org/ncbigene/286133", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "scavenger receptor class A, member 5" }, "metanode": "Gene" }, { "id": 21440, "identifier": "GO:0002792", "identifier_type": "str", "name": "negative regulation of peptide secretion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002792", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }