Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=21450

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=21475",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=21425",
    "results": [
        {
            "id": 21441,
            "identifier": "63036",
            "identifier_type": "int",
            "name": "CELA2A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/63036",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "chymotrypsin-like elastase family, member 2A"
            },
            "metanode": "Gene"
        },
        {
            "id": 21442,
            "identifier": "84957",
            "identifier_type": "int",
            "name": "RELT",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84957",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "RELT tumor necrosis factor receptor"
            },
            "metanode": "Gene"
        },
        {
            "id": 21443,
            "identifier": "UBERON:0001827",
            "identifier_type": "str",
            "name": "secretion of lacrimal gland",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0001827",
                "bto_id": "BTO:0001499",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D013666"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 21444,
            "identifier": "GO:0006913",
            "identifier_type": "str",
            "name": "nucleocytoplasmic transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006913",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 21445,
            "identifier": "6832",
            "identifier_type": "int",
            "name": "SUPV3L1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6832",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "suppressor of var1, 3-like 1 (S. cerevisiae)"
            },
            "metanode": "Gene"
        },
        {
            "id": 21446,
            "identifier": "GO:0005308",
            "identifier_type": "str",
            "name": "creatine transmembrane transporter activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005308",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 21447,
            "identifier": "C2721559",
            "identifier_type": "str",
            "name": "Osmotic demyelination syndrome",
            "properties": {
                "url": "http://identifiers.org/umls/C2721559",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 21448,
            "identifier": "25813",
            "identifier_type": "int",
            "name": "SAMM50",
            "properties": {
                "url": "http://identifiers.org/ncbigene/25813",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "SAMM50 sorting and assembly machinery component"
            },
            "metanode": "Gene"
        },
        {
            "id": 21449,
            "identifier": "1536",
            "identifier_type": "int",
            "name": "CYBB",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1536",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "cytochrome b-245, beta polypeptide"
            },
            "metanode": "Gene"
        },
        {
            "id": 21450,
            "identifier": "10171",
            "identifier_type": "int",
            "name": "RCL1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10171",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "RNA terminal phosphate cyclase-like 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 21451,
            "identifier": "C0235648",
            "identifier_type": "str",
            "name": "Breast enlargement female",
            "properties": {
                "url": "http://identifiers.org/umls/C0235648",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 21452,
            "identifier": "GO:0035194",
            "identifier_type": "str",
            "name": "posttranscriptional gene silencing by RNA",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035194",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 21453,
            "identifier": "4005",
            "identifier_type": "int",
            "name": "LMO2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4005",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "LIM domain only 2 (rhombotin-like 1)"
            },
            "metanode": "Gene"
        },
        {
            "id": 21454,
            "identifier": "139728",
            "identifier_type": "int",
            "name": "PNCK",
            "properties": {
                "url": "http://identifiers.org/ncbigene/139728",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "pregnancy up-regulated nonubiquitous CaM kinase"
            },
            "metanode": "Gene"
        },
        {
            "id": 21455,
            "identifier": "GO:0043434",
            "identifier_type": "str",
            "name": "response to peptide hormone",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0043434",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 21456,
            "identifier": "GO:0033216",
            "identifier_type": "str",
            "name": "ferric iron import",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0033216",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 21457,
            "identifier": "C0037317",
            "identifier_type": "str",
            "name": "Sleep disturbance",
            "properties": {
                "url": "http://identifiers.org/umls/C0037317",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 21458,
            "identifier": "C1142520",
            "identifier_type": "str",
            "name": "Nail pigmentation",
            "properties": {
                "url": "http://identifiers.org/umls/C1142520",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 21459,
            "identifier": "DB04890",
            "identifier_type": "str",
            "name": "Bepotastine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB04890",
                "inchi": "InChI=1S/C21H25ClN2O3/c22-17-8-6-16(7-9-17)21(19-4-1-2-12-23-19)27-18-10-14-24(15-11-18)13-3-5-20(25)26/h1-2,4,6-9,12,18,21H,3,5,10-11,13-15H2,(H,25,26)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=YWGDOWXRIALTES-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 21460,
            "identifier": "GO:2001190",
            "identifier_type": "str",
            "name": "positive regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2001190",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 21461,
            "identifier": "GO:0003826",
            "identifier_type": "str",
            "name": "alpha-ketoacid dehydrogenase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0003826",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 21462,
            "identifier": "UBERON:0002055",
            "identifier_type": "str",
            "name": "zona reticularis of adrenal gland",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0002055",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D015385"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 21463,
            "identifier": "C0235282",
            "identifier_type": "str",
            "name": "Ear roaring",
            "properties": {
                "url": "http://identifiers.org/umls/C0235282",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 21464,
            "identifier": "100506627",
            "identifier_type": "int",
            "name": "DCDC5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100506627",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "doublecortin domain containing 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 21465,
            "identifier": "DB00131",
            "identifier_type": "str",
            "name": "Adenosine monophosphate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00131",
                "inchi": "InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=UDMBCSSLTHHNCD-KQYNXXCUSA-N"
            },
            "metanode": "Compound"
        }
    ]
}