Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=21500
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=21525", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=21475", "results": [ { "id": 21491, "identifier": "PC7_3677", "identifier_type": "str", "name": "Ephrin A reverse signaling", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 21492, "identifier": "654348", "identifier_type": "int", "name": "PRAMEF16", "properties": { "url": "http://identifiers.org/ncbigene/654348", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "PRAME family member 16" }, "metanode": "Gene" }, { "id": 21493, "identifier": "GO:0070434", "identifier_type": "str", "name": "positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0070434", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21494, "identifier": "5267", "identifier_type": "int", "name": "SERPINA4", "properties": { "url": "http://identifiers.org/ncbigene/5267", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4" }, "metanode": "Gene" }, { "id": 21495, "identifier": "51321", "identifier_type": "int", "name": "AMZ2", "properties": { "url": "http://identifiers.org/ncbigene/51321", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "archaelysin family metallopeptidase 2" }, "metanode": "Gene" }, { "id": 21496, "identifier": "23362", "identifier_type": "int", "name": "PSD3", "properties": { "url": "http://identifiers.org/ncbigene/23362", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "pleckstrin and Sec7 domain containing 3" }, "metanode": "Gene" }, { "id": 21497, "identifier": "PC7_8762", "identifier_type": "str", "name": "Vitamins B6 activation to pyridoxal phosphate", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 21498, "identifier": "PC7_4285", "identifier_type": "str", "name": "Glypican 2 network", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 21499, "identifier": "GO:0015211", "identifier_type": "str", "name": "purine nucleoside transmembrane transporter activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0015211", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 21500, "identifier": "D000377", "identifier_type": "str", "name": "Agnosia", "properties": { "url": "http://identifiers.org/mesh/D000377", "source": "MeSH", "license": "CC0 1.0" }, "metanode": "Symptom" }, { "id": 21501, "identifier": "GO:0051225", "identifier_type": "str", "name": "spindle assembly", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0051225", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21502, "identifier": "GO:0002181", "identifier_type": "str", "name": "cytoplasmic translation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002181", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21503, "identifier": "GO:0015991", "identifier_type": "str", "name": "ATP hydrolysis coupled proton transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0015991", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21504, "identifier": "GO:0030148", "identifier_type": "str", "name": "sphingolipid biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030148", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21505, "identifier": "79648", "identifier_type": "int", "name": "MCPH1", "properties": { "url": "http://identifiers.org/ncbigene/79648", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "microcephalin 1" }, "metanode": "Gene" }, { "id": 21506, "identifier": "GO:0046854", "identifier_type": "str", "name": "phosphatidylinositol phosphorylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0046854", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21507, "identifier": "PC7_2830", "identifier_type": "str", "name": "Cyclin A:Cdk2-associated events at S phase entry", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 21508, "identifier": "C0014488", "identifier_type": "str", "name": "Epicondylitis", "properties": { "url": "http://identifiers.org/umls/C0014488", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 21509, "identifier": "GO:0005869", "identifier_type": "str", "name": "dynactin complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005869", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 21510, "identifier": "797", "identifier_type": "int", "name": "CALCB", "properties": { "url": "http://identifiers.org/ncbigene/797", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "calcitonin-related polypeptide beta" }, "metanode": "Gene" }, { "id": 21511, "identifier": "C0020440", "identifier_type": "str", "name": "Hypercapnia", "properties": { "url": "http://identifiers.org/umls/C0020440", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 21512, "identifier": "GO:0070679", "identifier_type": "str", "name": "inositol 1,4,5 trisphosphate binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0070679", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 21513, "identifier": "GO:0030203", "identifier_type": "str", "name": "glycosaminoglycan metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030203", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21514, "identifier": "GO:0044313", "identifier_type": "str", "name": "protein K6-linked deubiquitination", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0044313", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 21515, "identifier": "PC7_8361", "identifier_type": "str", "name": "Transport to the Golgi and subsequent modification", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" } ] }