Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=22175

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=22200",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=22150",
    "results": [
        {
            "id": 22165,
            "identifier": "C0740651",
            "identifier_type": "str",
            "name": "Abdominal symptom",
            "properties": {
                "url": "http://identifiers.org/umls/C0740651",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 22166,
            "identifier": "GO:2000008",
            "identifier_type": "str",
            "name": "regulation of protein localization to cell surface",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000008",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 22167,
            "identifier": "GO:0006323",
            "identifier_type": "str",
            "name": "DNA packaging",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006323",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 22168,
            "identifier": "DB01625",
            "identifier_type": "str",
            "name": "Isopropamide",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01625",
                "inchi": "InChI=1S/C23H32N2O/c1-18(2)25(5,19(3)4)17-16-23(22(24)26,20-12-8-6-9-13-20)21-14-10-7-11-15-21/h6-15,18-19H,16-17H2,1-5H3,(H-,24,26)/p+1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=JTPUMZTWMWIVPA-UHFFFAOYSA-O"
            },
            "metanode": "Compound"
        },
        {
            "id": 22169,
            "identifier": "6615",
            "identifier_type": "int",
            "name": "SNAI1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6615",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "snail family zinc finger 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 22170,
            "identifier": "GO:0005741",
            "identifier_type": "str",
            "name": "mitochondrial outer membrane",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005741",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 22171,
            "identifier": "GO:0001640",
            "identifier_type": "str",
            "name": "adenylate cyclase inhibiting G-protein coupled glutamate receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0001640",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 22172,
            "identifier": "C0018818",
            "identifier_type": "str",
            "name": "Ventricular septal defect",
            "properties": {
                "url": "http://identifiers.org/umls/C0018818",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 22173,
            "identifier": "C0948857",
            "identifier_type": "str",
            "name": "Electrocardiogram repolarisation abnormality",
            "properties": {
                "url": "http://identifiers.org/umls/C0948857",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 22174,
            "identifier": "401190",
            "identifier_type": "int",
            "name": "RGS7BP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/401190",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "regulator of G-protein signaling 7 binding protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 22175,
            "identifier": "102725060",
            "identifier_type": "int",
            "name": "LOC102725060",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102725060",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "RNA polymerase II transcription factor SIII subunit A3-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 22176,
            "identifier": "GO:0032422",
            "identifier_type": "str",
            "name": "purine-rich negative regulatory element binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032422",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 22177,
            "identifier": "5672",
            "identifier_type": "int",
            "name": "PSG4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5672",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "pregnancy specific beta-1-glycoprotein 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 22178,
            "identifier": "DB00576",
            "identifier_type": "str",
            "name": "Sulfamethizole",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00576",
                "inchi": "InChI=1S/C9H10N4O2S2/c1-6-11-12-9(16-6)13-17(14,15)8-4-2-7(10)3-5-8/h2-5H,10H2,1H3,(H,12,13)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=VACCAVUAMIDAGB-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 22179,
            "identifier": "GO:1903862",
            "identifier_type": "str",
            "name": "positive regulation of oxidative phosphorylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1903862",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 22180,
            "identifier": "C0235081",
            "identifier_type": "str",
            "name": "Tremor limb",
            "properties": {
                "url": "http://identifiers.org/umls/C0235081",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 22181,
            "identifier": "1191",
            "identifier_type": "int",
            "name": "CLU",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1191",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "clusterin"
            },
            "metanode": "Gene"
        },
        {
            "id": 22182,
            "identifier": "9938",
            "identifier_type": "int",
            "name": "ARHGAP25",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9938",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "Rho GTPase activating protein 25"
            },
            "metanode": "Gene"
        },
        {
            "id": 22183,
            "identifier": "WP357_r70641",
            "identifier_type": "str",
            "name": "Fatty Acid Biosynthesis",
            "properties": {
                "url": "http://www.wikipathways.org/instance/WP357_r70641",
                "source": "WikiPathways",
                "license": "CC BY 3.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 22184,
            "identifier": "GO:0034628",
            "identifier_type": "str",
            "name": "'de novo' NAD biosynthetic process from aspartate",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034628",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 22185,
            "identifier": "N0000000246",
            "identifier_type": "str",
            "name": "HIV Protease Inhibitors",
            "properties": {
                "url": "http://purl.bioontology.org/ontology/NDFRT/N0000000246",
                "source": "FDA via DrugCentral",
                "license": "CC BY 4.0",
                "class_type": "Mechanism of Action"
            },
            "metanode": "Pharmacologic Class"
        },
        {
            "id": 22186,
            "identifier": "GO:0070033",
            "identifier_type": "str",
            "name": "synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070033",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 22187,
            "identifier": "DB00146",
            "identifier_type": "str",
            "name": "Calcidiol",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00146",
                "inchi": "InChI=1S/C27H44O2/c1-19-10-13-23(28)18-22(19)12-11-21-9-7-17-27(5)24(14-15-25(21)27)20(2)8-6-16-26(3,4)29/h11-12,20,23-25,28-29H,1,6-10,13-18H2,2-5H3/b21-11+,22-12-/t20-,23+,24-,25+,27-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=JWUBBDSIWDLEOM-DTOXIADCSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 22188,
            "identifier": "GO:0051731",
            "identifier_type": "str",
            "name": "polynucleotide 5'-hydroxyl-kinase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051731",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 22189,
            "identifier": "10636",
            "identifier_type": "int",
            "name": "RGS14",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10636",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "regulator of G-protein signaling 14"
            },
            "metanode": "Gene"
        }
    ]
}