Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=2225

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=2250",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=2200",
    "results": [
        {
            "id": 2217,
            "identifier": "C0041912",
            "identifier_type": "str",
            "name": "Upper respiratory tract infection",
            "properties": {
                "url": "http://identifiers.org/umls/C0041912",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 2218,
            "identifier": "653308",
            "identifier_type": "int",
            "name": "ASAH2B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/653308",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B"
            },
            "metanode": "Gene"
        },
        {
            "id": 2219,
            "identifier": "26574",
            "identifier_type": "int",
            "name": "AATF",
            "properties": {
                "url": "http://identifiers.org/ncbigene/26574",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "apoptosis antagonizing transcription factor"
            },
            "metanode": "Gene"
        },
        {
            "id": 2220,
            "identifier": "GO:0009189",
            "identifier_type": "str",
            "name": "deoxyribonucleoside diphosphate biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0009189",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 2221,
            "identifier": "171546",
            "identifier_type": "int",
            "name": "SPTSSA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/171546",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "serine palmitoyltransferase, small subunit A"
            },
            "metanode": "Gene"
        },
        {
            "id": 2222,
            "identifier": "390637",
            "identifier_type": "int",
            "name": "GDPGP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/390637",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "GDP-D-glucose phosphorylase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 2223,
            "identifier": "101928093",
            "identifier_type": "int",
            "name": "LOC101928093",
            "properties": {
                "url": "http://identifiers.org/ncbigene/101928093",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "uncharacterized LOC101928093"
            },
            "metanode": "Gene"
        },
        {
            "id": 2224,
            "identifier": "670",
            "identifier_type": "int",
            "name": "BPHL",
            "properties": {
                "url": "http://identifiers.org/ncbigene/670",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "biphenyl hydrolase-like (serine hydrolase)"
            },
            "metanode": "Gene"
        },
        {
            "id": 2225,
            "identifier": "728715",
            "identifier_type": "int",
            "name": "LOC728715",
            "properties": {
                "url": "http://identifiers.org/ncbigene/728715",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "ovostatin homolog 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 2226,
            "identifier": "GO:0071384",
            "identifier_type": "str",
            "name": "cellular response to corticosteroid stimulus",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071384",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 2227,
            "identifier": "3123",
            "identifier_type": "int",
            "name": "HLA-DRB1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3123",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "major histocompatibility complex, class II, DR beta 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 2228,
            "identifier": "200728",
            "identifier_type": "int",
            "name": "TMEM17",
            "properties": {
                "url": "http://identifiers.org/ncbigene/200728",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "transmembrane protein 17"
            },
            "metanode": "Gene"
        },
        {
            "id": 2229,
            "identifier": "C0265294",
            "identifier_type": "str",
            "name": "Metaphyseal dysplasia",
            "properties": {
                "url": "http://identifiers.org/umls/C0265294",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 2230,
            "identifier": "GO:0070424",
            "identifier_type": "str",
            "name": "regulation of nucleotide-binding oligomerization domain containing signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070424",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 2231,
            "identifier": "C0020255",
            "identifier_type": "str",
            "name": "Hydrocephalus",
            "properties": {
                "url": "http://identifiers.org/umls/C0020255",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 2232,
            "identifier": "DB00993",
            "identifier_type": "str",
            "name": "Azathioprine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00993",
                "inchi": "InChI=1S/C9H7N7O2S/c1-15-4-14-7(16(17)18)9(15)19-8-5-6(11-2-10-5)12-3-13-8/h2-4H,1H3,(H,10,11,12,13)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=LMEKQMALGUDUQG-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 2233,
            "identifier": "GO:2000145",
            "identifier_type": "str",
            "name": "regulation of cell motility",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000145",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 2234,
            "identifier": "GO:0032534",
            "identifier_type": "str",
            "name": "regulation of microvillus assembly",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032534",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 2235,
            "identifier": "81930",
            "identifier_type": "int",
            "name": "KIF18A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/81930",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "kinesin family member 18A"
            },
            "metanode": "Gene"
        },
        {
            "id": 2236,
            "identifier": "90693",
            "identifier_type": "int",
            "name": "CCDC126",
            "properties": {
                "url": "http://identifiers.org/ncbigene/90693",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "coiled-coil domain containing 126"
            },
            "metanode": "Gene"
        },
        {
            "id": 2237,
            "identifier": "DB00492",
            "identifier_type": "str",
            "name": "Fosinopril",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00492",
                "inchi": "InChI=1S/C30H46NO7P/c1-4-28(33)37-30(22(2)3)38-39(36,18-12-11-15-23-13-7-5-8-14-23)21-27(32)31-20-25(19-26(31)29(34)35)24-16-9-6-10-17-24/h5,7-8,13-14,22,24-26,30H,4,6,9-12,15-21H2,1-3H3,(H,34,35)/t25-,26+,30?,39?/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=BIDNLKIUORFRQP-FKDWWROVSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 2238,
            "identifier": "23559",
            "identifier_type": "int",
            "name": "WBP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23559",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "WW domain binding protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 2239,
            "identifier": "GO:0070087",
            "identifier_type": "str",
            "name": "chromo shadow domain binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070087",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 2240,
            "identifier": "GO:0048015",
            "identifier_type": "str",
            "name": "phosphatidylinositol-mediated signaling",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048015",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 2241,
            "identifier": "GO:0009123",
            "identifier_type": "str",
            "name": "nucleoside monophosphate metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0009123",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}