Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=22375

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=22400",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=22350",
    "results": [
        {
            "id": 22363,
            "identifier": "GO:1903726",
            "identifier_type": "str",
            "name": "negative regulation of phospholipid metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1903726",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 22364,
            "identifier": "GO:0090208",
            "identifier_type": "str",
            "name": "positive regulation of triglyceride metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090208",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 22365,
            "identifier": "1149",
            "identifier_type": "int",
            "name": "CIDEA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1149",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "cell death-inducing DFFA-like effector a"
            },
            "metanode": "Gene"
        },
        {
            "id": 22366,
            "identifier": "9640",
            "identifier_type": "int",
            "name": "ZNF592",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9640",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "zinc finger protein 592"
            },
            "metanode": "Gene"
        },
        {
            "id": 22367,
            "identifier": "51171",
            "identifier_type": "int",
            "name": "HSD17B14",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51171",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "hydroxysteroid (17-beta) dehydrogenase 14"
            },
            "metanode": "Gene"
        },
        {
            "id": 22368,
            "identifier": "441161",
            "identifier_type": "int",
            "name": "OOEP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/441161",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "oocyte expressed protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 22369,
            "identifier": "200810",
            "identifier_type": "int",
            "name": "ALG1L",
            "properties": {
                "url": "http://identifiers.org/ncbigene/200810",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 22370,
            "identifier": "DB00392",
            "identifier_type": "str",
            "name": "Ethopropazine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00392",
                "inchi": "InChI=1S/C19H24N2S/c1-4-20(5-2)15(3)14-21-16-10-6-8-12-18(16)22-19-13-9-7-11-17(19)21/h6-13,15H,4-5,14H2,1-3H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=CDOZDBSBBXSXLB-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 22371,
            "identifier": "GO:0042633",
            "identifier_type": "str",
            "name": "hair cycle",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0042633",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 22372,
            "identifier": "PC7_1528",
            "identifier_type": "str",
            "name": "Activation of C3 and C5",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 22373,
            "identifier": "C0030521",
            "identifier_type": "str",
            "name": "Parathyroid tumour",
            "properties": {
                "url": "http://identifiers.org/umls/C0030521",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 22374,
            "identifier": "GO:0045986",
            "identifier_type": "str",
            "name": "negative regulation of smooth muscle contraction",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045986",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 22375,
            "identifier": "283713",
            "identifier_type": "int",
            "name": "LOC283713",
            "properties": {
                "url": "http://identifiers.org/ncbigene/283713",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "uncharacterized LOC283713"
            },
            "metanode": "Gene"
        },
        {
            "id": 22376,
            "identifier": "10594",
            "identifier_type": "int",
            "name": "PRPF8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10594",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "pre-mRNA processing factor 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 22377,
            "identifier": "DB00817",
            "identifier_type": "str",
            "name": "Rosoxacin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00817",
                "inchi": "InChI=1S/C17H14N2O3/c1-2-19-10-14(17(21)22)16(20)13-4-3-12(9-15(13)19)11-5-7-18-8-6-11/h3-10H,2H2,1H3,(H,21,22)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=XBPZXDSZHPDXQU-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 22378,
            "identifier": "391365",
            "identifier_type": "int",
            "name": "SULT6B1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/391365",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "sulfotransferase family, cytosolic, 6B, member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 22379,
            "identifier": "84750",
            "identifier_type": "int",
            "name": "FUT10",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84750",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "fucosyltransferase 10 (alpha (1,3) fucosyltransferase)"
            },
            "metanode": "Gene"
        },
        {
            "id": 22380,
            "identifier": "DB00220",
            "identifier_type": "str",
            "name": "Nelfinavir",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00220",
                "inchi": "InChI=1S/C32H45N3O4S/c1-21-25(15-10-16-28(21)36)30(38)33-26(20-40-24-13-6-5-7-14-24)29(37)19-35-18-23-12-9-8-11-22(23)17-27(35)31(39)34-32(2,3)4/h5-7,10,13-16,22-23,26-27,29,36-37H,8-9,11-12,17-20H2,1-4H3,(H,33,38)(H,34,39)/t22-,23+,26-,27-,29+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=QAGYKUNXZHXKMR-HKWSIXNMSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 22381,
            "identifier": "115290",
            "identifier_type": "int",
            "name": "FBXO17",
            "properties": {
                "url": "http://identifiers.org/ncbigene/115290",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "F-box protein 17"
            },
            "metanode": "Gene"
        },
        {
            "id": 22382,
            "identifier": "6881",
            "identifier_type": "int",
            "name": "TAF10",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6881",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 22383,
            "identifier": "56919",
            "identifier_type": "int",
            "name": "DHX33",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56919",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
            },
            "metanode": "Gene"
        },
        {
            "id": 22384,
            "identifier": "388394",
            "identifier_type": "int",
            "name": "RPRML",
            "properties": {
                "url": "http://identifiers.org/ncbigene/388394",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "reprimo-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 22385,
            "identifier": "C2732728",
            "identifier_type": "str",
            "name": "Body height decreased",
            "properties": {
                "url": "http://identifiers.org/umls/C2732728",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 22386,
            "identifier": "1457",
            "identifier_type": "int",
            "name": "CSNK2A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1457",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "casein kinase 2, alpha 1 polypeptide"
            },
            "metanode": "Gene"
        },
        {
            "id": 22387,
            "identifier": "10220",
            "identifier_type": "int",
            "name": "GDF11",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10220",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "growth differentiation factor 11"
            },
            "metanode": "Gene"
        }
    ]
}