Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=23500
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=23525", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=23475", "results": [ { "id": 23492, "identifier": "GO:0006505", "identifier_type": "str", "name": "GPI anchor metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006505", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23493, "identifier": "84932", "identifier_type": "int", "name": "RAB2B", "properties": { "url": "http://identifiers.org/ncbigene/84932", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "RAB2B, member RAS oncogene family" }, "metanode": "Gene" }, { "id": 23494, "identifier": "PC7_8720", "identifier_type": "str", "name": "Vitamin B1 (thiamin) metabolism", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 23496, "identifier": "C0001807", "identifier_type": "str", "name": "Aggression", "properties": { "url": "http://identifiers.org/umls/C0001807", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 23497, "identifier": "C0235756", "identifier_type": "str", "name": "Semen abnormal", "properties": { "url": "http://identifiers.org/umls/C0235756", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 23498, "identifier": "C0282488", "identifier_type": "str", "name": "Cystitis interstitial", "properties": { "url": "http://identifiers.org/umls/C0282488", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 23499, "identifier": "126432", "identifier_type": "int", "name": "RINL", "properties": { "url": "http://identifiers.org/ncbigene/126432", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "Ras and Rab interactor-like" }, "metanode": "Gene" }, { "id": 23500, "identifier": "GO:0005814", "identifier_type": "str", "name": "centriole", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005814", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 23501, "identifier": "GO:0008213", "identifier_type": "str", "name": "protein alkylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0008213", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23502, "identifier": "GO:0043314", "identifier_type": "str", "name": "negative regulation of neutrophil degranulation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043314", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23503, "identifier": "10146", "identifier_type": "int", "name": "G3BP1", "properties": { "url": "http://identifiers.org/ncbigene/10146", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "GTPase activating protein (SH3 domain) binding protein 1" }, "metanode": "Gene" }, { "id": 23504, "identifier": "GO:0000082", "identifier_type": "str", "name": "G1/S transition of mitotic cell cycle", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0000082", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23505, "identifier": "C0151505", "identifier_type": "str", "name": "Application site reaction", "properties": { "url": "http://identifiers.org/umls/C0151505", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 23506, "identifier": "C0158252", "identifier_type": "str", "name": "Intervertebral disc disorder", "properties": { "url": "http://identifiers.org/umls/C0158252", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 23507, "identifier": "GO:0006407", "identifier_type": "str", "name": "rRNA export from nucleus", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006407", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23508, "identifier": "GO:0004842", "identifier_type": "str", "name": "ubiquitin-protein transferase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0004842", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 23509, "identifier": "3980", "identifier_type": "int", "name": "LIG3", "properties": { "url": "http://identifiers.org/ncbigene/3980", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "ligase III, DNA, ATP-dependent" }, "metanode": "Gene" }, { "id": 23510, "identifier": "8647", "identifier_type": "int", "name": "ABCB11", "properties": { "url": "http://identifiers.org/ncbigene/8647", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "ATP-binding cassette, sub-family B (MDR/TAP), member 11" }, "metanode": "Gene" }, { "id": 23511, "identifier": "105373551", "identifier_type": "int", "name": "LOC105373551", "properties": { "url": "http://identifiers.org/ncbigene/105373551", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "uncharacterized LOC105373551" }, "metanode": "Gene" }, { "id": 23512, "identifier": "11100", "identifier_type": "int", "name": "HNRNPUL1", "properties": { "url": "http://identifiers.org/ncbigene/11100", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "heterogeneous nuclear ribonucleoprotein U-like 1" }, "metanode": "Gene" }, { "id": 23513, "identifier": "GO:0032075", "identifier_type": "str", "name": "positive regulation of nuclease activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032075", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23514, "identifier": "PC7_6992", "identifier_type": "str", "name": "Role of Calcineurin-dependent NFAT signaling in lymphocytes", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 23515, "identifier": "GO:0090399", "identifier_type": "str", "name": "replicative senescence", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0090399", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23516, "identifier": "GO:1903217", "identifier_type": "str", "name": "negative regulation of protein processing involved in protein targeting to mitochondrion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903217", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23517, "identifier": "GO:0019318", "identifier_type": "str", "name": "hexose metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0019318", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }